Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lcn3Q62471 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lcn3Q62471 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lcn3Q62471 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
Lcn3Q62471 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.23■□□□□ 0.35
Lcn3Q62471 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lcn3Q62471 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.23■□□□□ 0.35
Lcn3Q62471 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lcn3Q62471 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lcn3Q62471 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.22■□□□□ 0.35
Lcn3Q62471 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.22■□□□□ 0.35
Lcn3Q62471 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lcn3Q62471 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.21■□□□□ 0.35
Lcn3Q62471 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lcn3Q62471 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lcn3Q62471 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lcn3Q62471 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.21■□□□□ 0.35
Lcn3Q62471 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lcn3Q62471 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lcn3Q62471 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Lcn3Q62471 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lcn3Q62471 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Lcn3Q62471 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.2■□□□□ 0.34
Lcn3Q62471 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lcn3Q62471 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Lcn3Q62471 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lcn3Q62471 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Lcn3Q62471 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lcn3Q62471 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.2■□□□□ 0.34
Lcn3Q62471 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.19■□□□□ 0.34
Lcn3Q62471 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Gm6311-201ENSMUST00000073790 878 ntBASIC17.19■□□□□ 0.34
Lcn3Q62471 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lcn3Q62471 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lcn3Q62471 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lcn3Q62471 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lcn3Q62471 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lcn3Q62471 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lcn3Q62471 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.17■□□□□ 0.34
Lcn3Q62471 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lcn3Q62471 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms