Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SspnQ62147 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.65■□□□□ 0.26
SspnQ62147 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.65■□□□□ 0.26
SspnQ62147 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SspnQ62147 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SspnQ62147 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SspnQ62147 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.64■□□□□ 0.25
SspnQ62147 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SspnQ62147 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SspnQ62147 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.63■□□□□ 0.25
SspnQ62147 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
SspnQ62147 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SspnQ62147 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SspnQ62147 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.62■□□□□ 0.25
SspnQ62147 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.62■□□□□ 0.25
SspnQ62147 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SspnQ62147 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SspnQ62147 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SspnQ62147 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SspnQ62147 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SspnQ62147 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SspnQ62147 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SspnQ62147 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SspnQ62147 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SspnQ62147 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.6■□□□□ 0.25
SspnQ62147 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.6■□□□□ 0.25
SspnQ62147 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.6■□□□□ 0.25
SspnQ62147 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SspnQ62147 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SspnQ62147 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.6■□□□□ 0.25
SspnQ62147 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SspnQ62147 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SspnQ62147 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Gm5812-201ENSMUST00000061073 957 ntBASIC16.59■□□□□ 0.25
SspnQ62147 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.59■□□□□ 0.25
SspnQ62147 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SspnQ62147 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms