Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Traf4Q61382 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Traf4Q61382 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.59■□□□□ 0.41
Traf4Q61382 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.59■□□□□ 0.41
Traf4Q61382 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf4Q61382 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.58■□□□□ 0.41
Traf4Q61382 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Traf4Q61382 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Traf4Q61382 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Traf4Q61382 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Traf4Q61382 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf4Q61382 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Traf4Q61382 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf4Q61382 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Serp2-204ENSMUST00000228055 705 ntBASIC17.57■□□□□ 0.4
Traf4Q61382 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Traf4Q61382 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Traf4Q61382 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf4Q61382 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.56■□□□□ 0.4
Traf4Q61382 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.56■□□□□ 0.4
Traf4Q61382 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Traf4Q61382 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.56■□□□□ 0.4
Traf4Q61382 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Traf4Q61382 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf4Q61382 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.55■□□□□ 0.4
Traf4Q61382 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Traf4Q61382 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.55■□□□□ 0.4
Traf4Q61382 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf4Q61382 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Traf4Q61382 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf4Q61382 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf4Q61382 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Traf4Q61382 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.54■□□□□ 0.4
Traf4Q61382 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf4Q61382 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.53■□□□□ 0.4
Traf4Q61382 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.53■□□□□ 0.4
Traf4Q61382 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Traf4Q61382 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Traf4Q61382 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Traf4Q61382 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Traf4Q61382 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.52■□□□□ 0.4
Traf4Q61382 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.52■□□□□ 0.4
Traf4Q61382 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Traf4Q61382 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Traf4Q61382 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Traf4Q61382 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Traf4Q61382 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Traf4Q61382 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Traf4Q61382 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Traf4Q61382 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Traf4Q61382 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.51■□□□□ 0.39
Traf4Q61382 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms