Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7-2Q5R1I3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav7-2Q5R1I3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7-2Q5R1I3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7-2Q5R1I3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7-2Q5R1I3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7-2Q5R1I3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7-2Q5R1I3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trav7-2Q5R1I3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Etf1-202ENSMUST00000180351 108 ntBASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7-2Q5R1I3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav7-2Q5R1I3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7-2Q5R1I3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms