Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frem3Q5H8B9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Frem3Q5H8B9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Frem3Q5H8B9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Frem3Q5H8B9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Frem3Q5H8B9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.51■□□□□ 0.87
Frem3Q5H8B9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Frem3Q5H8B9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frem3Q5H8B9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Frem3Q5H8B9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Frem3Q5H8B9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Frem3Q5H8B9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Gm13234-201ENSMUST00000120010 747 ntBASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Frem3Q5H8B9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.47■□□□□ 0.87
Frem3Q5H8B9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.47■□□□□ 0.87
Frem3Q5H8B9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.46■□□□□ 0.87
Frem3Q5H8B9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Frem3Q5H8B9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Frem3Q5H8B9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Frem3Q5H8B9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Frem3Q5H8B9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Frem3Q5H8B9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Frem3Q5H8B9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Gm9988-201ENSMUST00000069786 435 ntBASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Frem3Q5H8B9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.4■□□□□ 0.86
Frem3Q5H8B9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Frem3Q5H8B9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Frem3Q5H8B9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.39■□□□□ 0.85
Frem3Q5H8B9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Frem3Q5H8B9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms