Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf223Q3UV31 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf223Q3UV31 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf223Q3UV31 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf223Q3UV31 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Gm26833-201ENSMUST00000180899 440 ntBASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf223Q3UV31 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Smad6-203ENSMUST00000179458 273 ntBASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf223Q3UV31 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf223Q3UV31 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Gm40848-201ENSMUST00000221998 324 ntBASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf223Q3UV31 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf223Q3UV31 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf223Q3UV31 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Gm43060-201ENSMUST00000200621 289 ntBASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf223Q3UV31 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf223Q3UV31 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf223Q3UV31 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms