Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrk1Q3UHC2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrk1Q3UHC2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lrrk1Q3UHC2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lrrk1Q3UHC2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.64■□□□□ 0.58
Lrrk1Q3UHC2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lrrk1Q3UHC2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrk1Q3UHC2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lrrk1Q3UHC2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrk1Q3UHC2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrk1Q3UHC2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lrrk1Q3UHC2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lrrk1Q3UHC2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Gm43017-201ENSMUST00000198296 752 ntBASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrk1Q3UHC2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.61■□□□□ 0.57
Lrrk1Q3UHC2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrk1Q3UHC2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrk1Q3UHC2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms