Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh6P97326 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh6P97326 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.31■□□□□ 0.84
Cdh6P97326 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cdh6P97326 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cdh6P97326 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cdh6P97326 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cdh6P97326 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh6P97326 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.3■□□□□ 0.84
Cdh6P97326 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh6P97326 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.3■□□□□ 0.84
Cdh6P97326 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cdh6P97326 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.29■□□□□ 0.84
Cdh6P97326 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh6P97326 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Gm21956-201ENSMUST00000179946 522 ntBASIC20.28■□□□□ 0.84
Cdh6P97326 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdh6P97326 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh6P97326 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.27■□□□□ 0.84
Cdh6P97326 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.27■□□□□ 0.84
Cdh6P97326 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh6P97326 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.27■□□□□ 0.83
Cdh6P97326 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
Cdh6P97326 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh6P97326 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cdh6P97326 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh6P97326 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh6P97326 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh6P97326 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh6P97326 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.26■□□□□ 0.83
Cdh6P97326 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Cdh6P97326 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh6P97326 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.25■□□□□ 0.83
Cdh6P97326 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdh6P97326 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Cdh6P97326 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cdh6P97326 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh6P97326 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Cdh6P97326 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.24■□□□□ 0.83
Cdh6P97326 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.24■□□□□ 0.83
Cdh6P97326 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdh6P97326 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh6P97326 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh6P97326 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Cdh6P97326 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
Cdh6P97326 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdh6P97326 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.23■□□□□ 0.83
Cdh6P97326 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
Cdh6P97326 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh6P97326 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh6P97326 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh6P97326 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.22■□□□□ 0.83
Cdh6P97326 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdh6P97326 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh6P97326 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms