Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.33■□□□□ 0.36
Atf1P81269 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf1P81269 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atf1P81269 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf1P81269 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.32■□□□□ 0.36
Atf1P81269 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf1P81269 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf1P81269 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf1P81269 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf1P81269 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf1P81269 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.3■□□□□ 0.36
Atf1P81269 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.3■□□□□ 0.36
Atf1P81269 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.3■□□□□ 0.36
Atf1P81269 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atf1P81269 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.3■□□□□ 0.36
Atf1P81269 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atf1P81269 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf1P81269 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Atf1P81269 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atf1P81269 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atf1P81269 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Gm15546-201ENSMUST00000122095 826 ntBASIC17.29■□□□□ 0.36
Atf1P81269 Gm7417-201ENSMUST00000192950 473 ntBASIC17.29■□□□□ 0.36
Atf1P81269 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf1P81269 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.28■□□□□ 0.36
Atf1P81269 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.28■□□□□ 0.36
Atf1P81269 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Gm9870-201ENSMUST00000063874 645 ntBASIC17.28■□□□□ 0.36
Atf1P81269 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atf1P81269 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf1P81269 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf1P81269 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf1P81269 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Atf1P81269 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf1P81269 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.27■□□□□ 0.36
Atf1P81269 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf1P81269 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf1P81269 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf1P81269 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Atf1P81269 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Atf1P81269 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf1P81269 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Atf1P81269 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf1P81269 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf1P81269 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf1P81269 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf1P81269 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Atf1P81269 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf1P81269 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atf1P81269 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atf1P81269 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms