Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgb1P63158 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgb1P63158 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.99■■□□□ 1.11
Hmgb1P63158 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Hmgb1P63158 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgb1P63158 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Hmgb1P63158 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.98■■□□□ 1.11
Hmgb1P63158 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.98■■□□□ 1.11
Hmgb1P63158 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgb1P63158 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgb1P63158 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.97■■□□□ 1.11
Hmgb1P63158 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Hmgb1P63158 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.97■■□□□ 1.11
Hmgb1P63158 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgb1P63158 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.97■■□□□ 1.11
Hmgb1P63158 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgb1P63158 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgb1P63158 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.96■■□□□ 1.11
Hmgb1P63158 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Gm5812-201ENSMUST00000061073 957 ntBASIC21.96■■□□□ 1.11
Hmgb1P63158 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgb1P63158 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Hmgb1P63158 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Hmgb1P63158 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Gm9870-201ENSMUST00000063874 645 ntBASIC21.95■■□□□ 1.1
Hmgb1P63158 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.95■■□□□ 1.1
Hmgb1P63158 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgb1P63158 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.94■■□□□ 1.1
Hmgb1P63158 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgb1P63158 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.94■■□□□ 1.1
Hmgb1P63158 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.93■■□□□ 1.1
Hmgb1P63158 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Hmgb1P63158 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Gm7417-201ENSMUST00000192950 473 ntBASIC21.93■■□□□ 1.1
Hmgb1P63158 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.93■■□□□ 1.1
Hmgb1P63158 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgb1P63158 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Hmgb1P63158 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgb1P63158 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.92■■□□□ 1.1
Hmgb1P63158 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgb1P63158 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgb1P63158 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Hmgb1P63158 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Hmgb1P63158 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.91■■□□□ 1.1
Hmgb1P63158 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgb1P63158 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.91■■□□□ 1.1
Hmgb1P63158 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgb1P63158 Gm15546-201ENSMUST00000122095 826 ntBASIC21.9■■□□□ 1.1
Hmgb1P63158 Mir6236-201ENSMUST00000184437 123 ntBASIC21.9■■□□□ 1.1
Hmgb1P63158 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms