Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Tpm1P58771 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.25■■□□□ 1.15
Tpm1P58771 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Tpm1P58771 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.25■■□□□ 1.15
Tpm1P58771 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tpm1P58771 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Tpm1P58771 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Tpm1P58771 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tpm1P58771 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.24■■□□□ 1.15
Tpm1P58771 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.24■■□□□ 1.15
Tpm1P58771 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.24■■□□□ 1.15
Tpm1P58771 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tpm1P58771 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tpm1P58771 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tpm1P58771 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tpm1P58771 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Tpm1P58771 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tpm1P58771 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tpm1P58771 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tpm1P58771 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.23■■□□□ 1.15
Tpm1P58771 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tpm1P58771 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.22■■□□□ 1.15
Tpm1P58771 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Tpm1P58771 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.22■■□□□ 1.15
Tpm1P58771 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Tpm1P58771 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tpm1P58771 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Gm11175-201ENSMUST00000116172 543 ntBASIC22.21■■□□□ 1.15
Tpm1P58771 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tpm1P58771 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Tpm1P58771 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tpm1P58771 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Tpm1P58771 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Tpm1P58771 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Tpm1P58771 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tpm1P58771 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.2■■□□□ 1.14
Tpm1P58771 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.2■■□□□ 1.14
Tpm1P58771 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tpm1P58771 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Tpm1P58771 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.2■■□□□ 1.14
Tpm1P58771 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tpm1P58771 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tpm1P58771 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tpm1P58771 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tpm1P58771 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tpm1P58771 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.19■■□□□ 1.14
Tpm1P58771 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tpm1P58771 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tpm1P58771 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Tpm1P58771 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Tpm1P58771 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.18■■□□□ 1.14
Tpm1P58771 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.18■■□□□ 1.14
Tpm1P58771 Gm12366-201ENSMUST00000121722 873 ntBASIC22.18■■□□□ 1.14
Tpm1P58771 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.18■■□□□ 1.14
Tpm1P58771 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.18■■□□□ 1.14
Tpm1P58771 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.18■■□□□ 1.14
Tpm1P58771 Gm5786-201ENSMUST00000085368 882 ntBASIC22.18■■□□□ 1.14
Tpm1P58771 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tpm1P58771 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Tpm1P58771 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Tpm1P58771 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tpm1P58771 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms