Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fdft1P53798 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Fdft1P53798 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fdft1P53798 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Fdft1P53798 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.9■□□□□ 0.78
Fdft1P53798 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.9■□□□□ 0.78
Fdft1P53798 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fdft1P53798 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Fdft1P53798 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Fdft1P53798 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fdft1P53798 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fdft1P53798 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fdft1P53798 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.89■□□□□ 0.77
Fdft1P53798 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fdft1P53798 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fdft1P53798 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fdft1P53798 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fdft1P53798 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Fdft1P53798 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fdft1P53798 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fdft1P53798 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fdft1P53798 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Fdft1P53798 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.87■□□□□ 0.77
Fdft1P53798 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.87■□□□□ 0.77
Fdft1P53798 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Fdft1P53798 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fdft1P53798 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fdft1P53798 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.87■□□□□ 0.77
Fdft1P53798 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.87■□□□□ 0.77
Fdft1P53798 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Fdft1P53798 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.86■□□□□ 0.77
Fdft1P53798 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.86■□□□□ 0.77
Fdft1P53798 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fdft1P53798 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.85■□□□□ 0.77
Fdft1P53798 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.85■□□□□ 0.77
Fdft1P53798 Rps24-207ENSMUST00000224568 714 ntBASIC19.85■□□□□ 0.77
Fdft1P53798 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.85■□□□□ 0.77
Fdft1P53798 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fdft1P53798 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Gm14117-201ENSMUST00000122417 843 ntBASIC19.84■□□□□ 0.77
Fdft1P53798 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fdft1P53798 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Fdft1P53798 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fdft1P53798 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.83■□□□□ 0.77
Fdft1P53798 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fdft1P53798 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Fdft1P53798 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Fdft1P53798 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.83■□□□□ 0.77
Fdft1P53798 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.83■□□□□ 0.77
Fdft1P53798 Gm45102-201ENSMUST00000207427 857 ntBASIC19.83■□□□□ 0.77
Fdft1P53798 Gm9870-201ENSMUST00000063874 645 ntBASIC19.83■□□□□ 0.77
Fdft1P53798 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fdft1P53798 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fdft1P53798 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fdft1P53798 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fdft1P53798 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fdft1P53798 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fdft1P53798 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.82■□□□□ 0.76
Fdft1P53798 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fdft1P53798 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fdft1P53798 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fdft1P53798 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.82■□□□□ 0.76
Fdft1P53798 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fdft1P53798 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms