Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox3P53784 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox3P53784 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.09■□□□□ 0.65
Sox3P53784 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox3P53784 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox3P53784 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.08■□□□□ 0.65
Sox3P53784 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox3P53784 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sox3P53784 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox3P53784 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.08■□□□□ 0.65
Sox3P53784 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.08■□□□□ 0.64
Sox3P53784 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox3P53784 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox3P53784 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Sox3P53784 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox3P53784 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox3P53784 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox3P53784 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox3P53784 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox3P53784 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.06■□□□□ 0.64
Sox3P53784 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sox3P53784 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox3P53784 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.05■□□□□ 0.64
Sox3P53784 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sox3P53784 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sox3P53784 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sox3P53784 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Sox3P53784 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sox3P53784 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox3P53784 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox3P53784 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox3P53784 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox3P53784 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Gm42642-201ENSMUST00000200683 355 ntBASIC19.03■□□□□ 0.64
Sox3P53784 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.03■□□□□ 0.64
Sox3P53784 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox3P53784 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox3P53784 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.02■□□□□ 0.64
Sox3P53784 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox3P53784 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox3P53784 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox3P53784 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sox3P53784 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.02■□□□□ 0.64
Sox3P53784 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox3P53784 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox3P53784 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox3P53784 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sox3P53784 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Sox3P53784 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.01■□□□□ 0.63
Sox3P53784 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.01■□□□□ 0.63
Sox3P53784 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox3P53784 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sox3P53784 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox3P53784 Iqck-206ENSMUST00000208658 2891 ntBASIC19.01■□□□□ 0.63
Sox3P53784 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox3P53784 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox3P53784 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox3P53784 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19■□□□□ 0.63
Sox3P53784 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19■□□□□ 0.63
Sox3P53784 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox3P53784 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sox3P53784 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox3P53784 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms