Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.77■□□□□ 0.28
Col8a2P25318 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Col8a2P25318 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col8a2P25318 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Col8a2P25318 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col8a2P25318 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col8a2P25318 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col8a2P25318 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.76■□□□□ 0.27
Col8a2P25318 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.76■□□□□ 0.27
Col8a2P25318 Gm8493-201ENSMUST00000196881 489 ntBASIC16.76■□□□□ 0.27
Col8a2P25318 Gm43173-201ENSMUST00000202246 593 ntBASIC16.76■□□□□ 0.27
Col8a2P25318 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.76■□□□□ 0.27
Col8a2P25318 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Col8a2P25318 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Col8a2P25318 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.76■□□□□ 0.27
Col8a2P25318 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col8a2P25318 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col8a2P25318 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col8a2P25318 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.75■□□□□ 0.27
Col8a2P25318 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col8a2P25318 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.74■□□□□ 0.27
Col8a2P25318 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col8a2P25318 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.74■□□□□ 0.27
Col8a2P25318 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.74■□□□□ 0.27
Col8a2P25318 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col8a2P25318 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col8a2P25318 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.73■□□□□ 0.27
Col8a2P25318 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.73■□□□□ 0.27
Col8a2P25318 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col8a2P25318 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col8a2P25318 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col8a2P25318 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col8a2P25318 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.71■□□□□ 0.27
Col8a2P25318 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col8a2P25318 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.71■□□□□ 0.27
Col8a2P25318 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col8a2P25318 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.71■□□□□ 0.27
Col8a2P25318 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.71■□□□□ 0.27
Col8a2P25318 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col8a2P25318 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col8a2P25318 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col8a2P25318 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
Col8a2P25318 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.7■□□□□ 0.26
Col8a2P25318 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Spcs1-204ENSMUST00000226782 949 ntBASIC16.7■□□□□ 0.26
Col8a2P25318 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.7■□□□□ 0.26
Col8a2P25318 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col8a2P25318 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Col8a2P25318 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms