Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgn1P18608 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgn1P18608 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmgn1P18608 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.33■□□□□ 0.52
Hmgn1P18608 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgn1P18608 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgn1P18608 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgn1P18608 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.33■□□□□ 0.52
Hmgn1P18608 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmgn1P18608 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmgn1P18608 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmgn1P18608 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgn1P18608 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgn1P18608 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgn1P18608 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgn1P18608 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hmgn1P18608 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmgn1P18608 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.3■□□□□ 0.52
Hmgn1P18608 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.3■□□□□ 0.52
Hmgn1P18608 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.3■□□□□ 0.52
Hmgn1P18608 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hmgn1P18608 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgn1P18608 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.3■□□□□ 0.52
Hmgn1P18608 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hmgn1P18608 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hmgn1P18608 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgn1P18608 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgn1P18608 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgn1P18608 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.28■□□□□ 0.52
Hmgn1P18608 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgn1P18608 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmgn1P18608 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgn1P18608 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmgn1P18608 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgn1P18608 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgn1P18608 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Hmgn1P18608 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgn1P18608 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgn1P18608 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.27■□□□□ 0.52
Hmgn1P18608 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgn1P18608 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgn1P18608 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Hmgn1P18608 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hmgn1P18608 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.26■□□□□ 0.51
Hmgn1P18608 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hmgn1P18608 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn1P18608 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.25■□□□□ 0.51
Hmgn1P18608 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn1P18608 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn1P18608 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn1P18608 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Hmgn1P18608 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn1P18608 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.24■□□□□ 0.51
Hmgn1P18608 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn1P18608 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hmgn1P18608 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn1P18608 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms