Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hoxc9P09633 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Hoxc9P09633 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC26.32■■□□□ 1.8
Hoxc9P09633 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Hoxc9P09633 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
Hoxc9P09633 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC26.31■■□□□ 1.8
Hoxc9P09633 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Hoxc9P09633 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC26.31■■□□□ 1.8
Hoxc9P09633 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hoxc9P09633 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.31■■□□□ 1.8
Hoxc9P09633 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
Hoxc9P09633 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hoxc9P09633 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.3■■□□□ 1.8
Hoxc9P09633 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.3■■□□□ 1.8
Hoxc9P09633 Spcs1-207ENSMUST00000228767 1008 ntBASIC26.3■■□□□ 1.8
Hoxc9P09633 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hoxc9P09633 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hoxc9P09633 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC26.29■■□□□ 1.8
Hoxc9P09633 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.29■■□□□ 1.8
Hoxc9P09633 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Hoxc9P09633 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Hoxc9P09633 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.28■■□□□ 1.8
Hoxc9P09633 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hoxc9P09633 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Hoxc9P09633 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hoxc9P09633 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC26.27■■□□□ 1.8
Hoxc9P09633 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
Hoxc9P09633 Gm9988-201ENSMUST00000069786 435 ntBASIC26.27■■□□□ 1.8
Hoxc9P09633 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.26■■□□□ 1.79
Hoxc9P09633 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.26■■□□□ 1.79
Hoxc9P09633 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hoxc9P09633 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc9P09633 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc9P09633 CT025689.6-201ENSMUST00000224991 1104 ntBASIC26.25■■□□□ 1.79
Hoxc9P09633 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc9P09633 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Hoxc9P09633 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc9P09633 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hoxc9P09633 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Hoxc9P09633 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hoxc9P09633 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc9P09633 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC26.23■■□□□ 1.79
Hoxc9P09633 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc9P09633 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hoxc9P09633 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Hoxc9P09633 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC26.22■■□□□ 1.79
Hoxc9P09633 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.22■■□□□ 1.79
Hoxc9P09633 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hoxc9P09633 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hoxc9P09633 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.21■■□□□ 1.79
Hoxc9P09633 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC26.21■■□□□ 1.79
Hoxc9P09633 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hoxc9P09633 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
Hoxc9P09633 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hoxc9P09633 Reep4-203ENSMUST00000226563 1444 ntBASIC26.21■■□□□ 1.79
Hoxc9P09633 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hoxc9P09633 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Gm27801-201ENSMUST00000184174 223 ntBASIC26.2■■□□□ 1.78
Hoxc9P09633 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC26.2■■□□□ 1.78
Hoxc9P09633 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hoxc9P09633 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms