Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.79■□□□□ 0.44
Hdac3O88895 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac3O88895 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Hdac3O88895 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Gm45102-201ENSMUST00000207427 857 ntBASIC17.78■□□□□ 0.44
Hdac3O88895 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac3O88895 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hdac3O88895 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hdac3O88895 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac3O88895 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac3O88895 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac3O88895 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac3O88895 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac3O88895 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hdac3O88895 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.76■□□□□ 0.43
Hdac3O88895 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.76■□□□□ 0.43
Hdac3O88895 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Gm9959-201ENSMUST00000068277 390 ntBASIC17.76■□□□□ 0.43
Hdac3O88895 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac3O88895 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.76■□□□□ 0.43
Hdac3O88895 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.75■□□□□ 0.43
Hdac3O88895 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Gm7143-201ENSMUST00000222811 859 ntBASIC17.75■□□□□ 0.43
Hdac3O88895 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac3O88895 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac3O88895 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac3O88895 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hdac3O88895 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac3O88895 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hdac3O88895 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac3O88895 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hdac3O88895 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
Hdac3O88895 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hdac3O88895 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.73■□□□□ 0.43
Hdac3O88895 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Hdac3O88895 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hdac3O88895 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Hdac3O88895 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
Hdac3O88895 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.72■□□□□ 0.43
Hdac3O88895 Rps24-207ENSMUST00000224568 714 ntBASIC17.72■□□□□ 0.43
Hdac3O88895 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hdac3O88895 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hdac3O88895 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.71■□□□□ 0.43
Hdac3O88895 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.71■□□□□ 0.43
Hdac3O88895 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hdac3O88895 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hdac3O88895 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.71■□□□□ 0.43
Hdac3O88895 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms