Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Sh2d1aO88890 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sh2d1aO88890 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.07□□□□□ -0.16
Sh2d1aO88890 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.07□□□□□ -0.16
Sh2d1aO88890 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.06□□□□□ -0.16
Sh2d1aO88890 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.06□□□□□ -0.16
Sh2d1aO88890 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Etf1-202ENSMUST00000180351 108 ntBASIC14.06□□□□□ -0.16
Sh2d1aO88890 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh2d1aO88890 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh2d1aO88890 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.04□□□□□ -0.16
Sh2d1aO88890 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.04□□□□□ -0.16
Sh2d1aO88890 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.04□□□□□ -0.16
Sh2d1aO88890 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2d1aO88890 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Gm7417-201ENSMUST00000192950 473 ntBASIC14.03□□□□□ -0.16
Sh2d1aO88890 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2d1aO88890 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2d1aO88890 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2d1aO88890 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh2d1aO88890 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2d1aO88890 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms