Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.37■□□□□ 0.69
Best1O88870 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Best1O88870 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Best1O88870 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.36■□□□□ 0.69
Best1O88870 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.36■□□□□ 0.69
Best1O88870 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Best1O88870 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Best1O88870 Gm43060-201ENSMUST00000200621 289 ntBASIC19.36■□□□□ 0.69
Best1O88870 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Best1O88870 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Best1O88870 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Best1O88870 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Best1O88870 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Best1O88870 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Best1O88870 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Best1O88870 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Best1O88870 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Best1O88870 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Best1O88870 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Best1O88870 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Best1O88870 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Best1O88870 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Best1O88870 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.34■□□□□ 0.69
Best1O88870 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Best1O88870 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Best1O88870 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Best1O88870 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Best1O88870 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.33■□□□□ 0.68
Best1O88870 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.33■□□□□ 0.68
Best1O88870 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Gm18284-201ENSMUST00000172604 624 ntBASIC19.33■□□□□ 0.68
Best1O88870 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Best1O88870 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Best1O88870 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Best1O88870 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Best1O88870 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Best1O88870 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Best1O88870 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.32■□□□□ 0.68
Best1O88870 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.31■□□□□ 0.68
Best1O88870 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Best1O88870 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Best1O88870 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Best1O88870 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.3■□□□□ 0.68
Best1O88870 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.3■□□□□ 0.68
Best1O88870 Gm8495-201ENSMUST00000188740 694 ntBASIC19.3■□□□□ 0.68
Best1O88870 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Best1O88870 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Best1O88870 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Gm11421-201ENSMUST00000122124 294 ntBASIC19.29■□□□□ 0.68
Best1O88870 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.29■□□□□ 0.68
Best1O88870 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.29■□□□□ 0.68
Best1O88870 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.29■□□□□ 0.68
Best1O88870 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.29■□□□□ 0.68
Best1O88870 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Best1O88870 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Best1O88870 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms