Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.4■□□□□ 0.7
ClppO88696 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClppO88696 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClppO88696 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClppO88696 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.39■□□□□ 0.7
ClppO88696 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ClppO88696 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ClppO88696 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.39■□□□□ 0.69
ClppO88696 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClppO88696 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClppO88696 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClppO88696 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ClppO88696 Mir7075-201ENSMUST00000184187 82 ntBASIC19.38■□□□□ 0.69
ClppO88696 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ClppO88696 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ClppO88696 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.37■□□□□ 0.69
ClppO88696 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClppO88696 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
ClppO88696 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ClppO88696 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Gm43530-201ENSMUST00000195920 274 ntBASIC19.36■□□□□ 0.69
ClppO88696 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ClppO88696 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ClppO88696 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.35■□□□□ 0.69
ClppO88696 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.35■□□□□ 0.69
ClppO88696 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ClppO88696 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ClppO88696 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClppO88696 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClppO88696 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ClppO88696 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClppO88696 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClppO88696 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ClppO88696 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ClppO88696 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClppO88696 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ClppO88696 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.33■□□□□ 0.68
ClppO88696 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ClppO88696 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClppO88696 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClppO88696 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Gm8495-201ENSMUST00000188740 694 ntBASIC19.32■□□□□ 0.68
ClppO88696 Gm8493-201ENSMUST00000196881 489 ntBASIC19.32■□□□□ 0.68
ClppO88696 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.32■□□□□ 0.68
ClppO88696 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ClppO88696 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.32■□□□□ 0.68
ClppO88696 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClppO88696 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ClppO88696 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
ClppO88696 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.31■□□□□ 0.68
ClppO88696 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms