Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh16O88338 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.54■□□□□ 0.72
Cdh16O88338 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh16O88338 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Cdh16O88338 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh16O88338 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh16O88338 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdh16O88338 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cdh16O88338 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh16O88338 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh16O88338 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh16O88338 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Cdh16O88338 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.52■□□□□ 0.72
Cdh16O88338 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdh16O88338 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cdh16O88338 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdh16O88338 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Cdh16O88338 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh16O88338 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cdh16O88338 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdh16O88338 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdh16O88338 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh16O88338 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdh16O88338 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.51■□□□□ 0.71
Cdh16O88338 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cdh16O88338 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdh16O88338 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdh16O88338 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh16O88338 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh16O88338 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdh16O88338 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh16O88338 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdh16O88338 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Cdh16O88338 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh16O88338 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdh16O88338 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Cdh16O88338 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh16O88338 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh16O88338 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh16O88338 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdh16O88338 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cdh16O88338 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh16O88338 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.46■□□□□ 0.71
Cdh16O88338 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdh16O88338 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.46■□□□□ 0.71
Cdh16O88338 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cdh16O88338 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh16O88338 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Cdh16O88338 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cdh16O88338 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh16O88338 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cdh16O88338 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh16O88338 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh16O88338 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms