Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chek1O35280 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.34■□□□□ 0.21
Chek1O35280 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Chek1O35280 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Chek1O35280 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chek1O35280 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chek1O35280 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chek1O35280 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chek1O35280 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chek1O35280 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.33■□□□□ 0.2
Chek1O35280 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.33■□□□□ 0.2
Chek1O35280 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chek1O35280 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chek1O35280 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chek1O35280 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chek1O35280 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chek1O35280 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.32■□□□□ 0.2
Chek1O35280 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chek1O35280 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.32■□□□□ 0.2
Chek1O35280 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chek1O35280 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chek1O35280 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chek1O35280 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.32■□□□□ 0.2
Chek1O35280 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chek1O35280 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.31■□□□□ 0.2
Chek1O35280 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Chek1O35280 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chek1O35280 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.31■□□□□ 0.2
Chek1O35280 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chek1O35280 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chek1O35280 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chek1O35280 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.3■□□□□ 0.2
Chek1O35280 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chek1O35280 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chek1O35280 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chek1O35280 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.29■□□□□ 0.2
Chek1O35280 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.29■□□□□ 0.2
Chek1O35280 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.29■□□□□ 0.2
Chek1O35280 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chek1O35280 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chek1O35280 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.29■□□□□ 0.2
Chek1O35280 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chek1O35280 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chek1O35280 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chek1O35280 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chek1O35280 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Chek1O35280 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chek1O35280 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chek1O35280 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chek1O35280 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Chek1O35280 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chek1O35280 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms