Protein–RNA interactions for Protein: O08842

Gfra2, GDNF family receptor alpha-2, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra2O08842 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.6■□□□□ 0.89
Gfra2O08842 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gfra2O08842 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Gfra2O08842 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gfra2O08842 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gfra2O08842 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Gfra2O08842 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.6■□□□□ 0.89
Gfra2O08842 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gfra2O08842 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.59■□□□□ 0.89
Gfra2O08842 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.59■□□□□ 0.89
Gfra2O08842 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gfra2O08842 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gfra2O08842 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gfra2O08842 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gfra2O08842 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Gfra2O08842 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gfra2O08842 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gfra2O08842 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.57■□□□□ 0.88
Gfra2O08842 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Gfra2O08842 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.57■□□□□ 0.88
Gfra2O08842 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gfra2O08842 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gfra2O08842 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Gfra2O08842 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra2O08842 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Gfra2O08842 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra2O08842 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra2O08842 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gfra2O08842 Gm18284-201ENSMUST00000172604 624 ntBASIC20.56■□□□□ 0.88
Gfra2O08842 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra2O08842 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra2O08842 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gfra2O08842 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra2O08842 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra2O08842 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gfra2O08842 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.54■□□□□ 0.88
Gfra2O08842 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.54■□□□□ 0.88
Gfra2O08842 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
Gfra2O08842 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra2O08842 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gfra2O08842 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gfra2O08842 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gfra2O08842 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gfra2O08842 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra2O08842 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra2O08842 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gfra2O08842 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.51■□□□□ 0.87
Gfra2O08842 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gfra2O08842 Gm8495-201ENSMUST00000188740 694 ntBASIC20.51■□□□□ 0.87
Gfra2O08842 Gm43060-201ENSMUST00000200621 289 ntBASIC20.51■□□□□ 0.87
Gfra2O08842 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gfra2O08842 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.51■□□□□ 0.87
Gfra2O08842 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Gfra2O08842 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gfra2O08842 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.51■□□□□ 0.87
Gfra2O08842 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gfra2O08842 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gfra2O08842 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Gfra2O08842 Gm40848-201ENSMUST00000221998 324 ntBASIC20.5■□□□□ 0.87
Gfra2O08842 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms