Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim55G3X8Y1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim55G3X8Y1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim55G3X8Y1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Trim55G3X8Y1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim55G3X8Y1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim55G3X8Y1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.39■□□□□ 0.85
Trim55G3X8Y1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim55G3X8Y1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim55G3X8Y1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim55G3X8Y1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim55G3X8Y1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.36■□□□□ 0.85
Trim55G3X8Y1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms