Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.98■□□□□ 0.31
Cpsf4lE9Q2N0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4lE9Q2N0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4lE9Q2N0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4lE9Q2N0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4lE9Q2N0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cpsf4lE9Q2N0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4lE9Q2N0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4lE9Q2N0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpsf4lE9Q2N0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpsf4lE9Q2N0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf4lE9Q2N0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms