Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28043E0CXC2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28043E0CXC2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.9■□□□□ 0.78
Gm28043E0CXC2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm28043E0CXC2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm28043E0CXC2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28043E0CXC2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Gm28043E0CXC2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28043E0CXC2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Gm28043E0CXC2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms