Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm11127A7VMS2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm11127A7VMS2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gm11127A7VMS2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm11127A7VMS2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm11127A7VMS2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm11127A7VMS2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm11127A7VMS2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm11127A7VMS2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm11127A7VMS2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm11127A7VMS2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms