Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-4A0A0G2JG37 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-4A0A0G2JG37 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-4A0A0G2JG37 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-4A0A0G2JG37 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Trav9d-4A0A0G2JG37 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms