Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv5A0A0B4J1G9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trbv5A0A0B4J1G9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.04■□□□□ 0.16
Trbv5A0A0B4J1G9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv5A0A0B4J1G9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv5A0A0B4J1G9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
Trbv5A0A0B4J1G9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv5A0A0B4J1G9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.02■□□□□ 0.15
Trbv5A0A0B4J1G9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv5A0A0B4J1G9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv5A0A0B4J1G9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv5A0A0B4J1G9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Trbv5A0A0B4J1G9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms