Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-3A0A075B6A4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav12d-3A0A075B6A4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12d-3A0A075B6A4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12d-3A0A075B6A4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12d-3A0A075B6A4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12d-3A0A075B6A4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12d-3A0A075B6A4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm45364-201ENSMUST00000210883 159 ntBASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12d-3A0A075B6A4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Trav12d-3A0A075B6A4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12d-3A0A075B6A4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms