Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-1A0A075B644 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13-1A0A075B644 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Gm43137-201ENSMUST00000198052 594 ntBASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-1A0A075B644 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-1A0A075B644 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-1A0A075B644 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Gm43530-201ENSMUST00000195920 274 ntBASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-1A0A075B644 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13-1A0A075B644 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms