Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Trav16d-dv11A0A075B617 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16d-dv11A0A075B617 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16d-dv11A0A075B617 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16d-dv11A0A075B617 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16d-dv11A0A075B617 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav16d-dv11A0A075B617 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav16d-dv11A0A075B617 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16d-dv11A0A075B617 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav16d-dv11A0A075B617 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms