Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Cspg4Q8VHY0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cspg4Q8VHY0 Peli2-204ENSMUST00000226513 1320 ntBASIC23.5■■□□□ 1.35
Cspg4Q8VHY0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cspg4Q8VHY0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cspg4Q8VHY0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cspg4Q8VHY0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cspg4Q8VHY0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cspg4Q8VHY0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.46■■□□□ 1.35
Cspg4Q8VHY0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cspg4Q8VHY0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.45■■□□□ 1.35
Cspg4Q8VHY0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cspg4Q8VHY0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Cspg4Q8VHY0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cspg4Q8VHY0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cspg4Q8VHY0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cspg4Q8VHY0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg4Q8VHY0 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.39■■□□□ 1.34
Cspg4Q8VHY0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cspg4Q8VHY0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cspg4Q8VHY0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg4Q8VHY0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Cspg4Q8VHY0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg4Q8VHY0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cspg4Q8VHY0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cspg4Q8VHY0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cspg4Q8VHY0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cspg4Q8VHY0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cspg4Q8VHY0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.31■■□□□ 1.32
Cspg4Q8VHY0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cspg4Q8VHY0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cspg4Q8VHY0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cspg4Q8VHY0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cspg4Q8VHY0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Cspg4Q8VHY0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.26■■□□□ 1.31
Cspg4Q8VHY0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cspg4Q8VHY0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Cspg4Q8VHY0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cspg4Q8VHY0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.21■■□□□ 1.31
Cspg4Q8VHY0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cspg4Q8VHY0 Gm9397-201ENSMUST00000200125 605 ntBASIC23.17■■□□□ 1.3
Cspg4Q8VHY0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cspg4Q8VHY0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cspg4Q8VHY0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.15■■□□□ 1.3
Cspg4Q8VHY0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cspg4Q8VHY0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Cspg4Q8VHY0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cspg4Q8VHY0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.11■■□□□ 1.29
Cspg4Q8VHY0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cspg4Q8VHY0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.09■■□□□ 1.29
Cspg4Q8VHY0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cspg4Q8VHY0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cspg4Q8VHY0 Gm8503-201ENSMUST00000118131 455 ntBASIC23.07■■□□□ 1.28
Cspg4Q8VHY0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cspg4Q8VHY0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cspg4Q8VHY0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Cspg4Q8VHY0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cspg4Q8VHY0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Cspg4Q8VHY0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cspg4Q8VHY0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.99■■□□□ 1.27
Cspg4Q8VHY0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cspg4Q8VHY0 Mipep-204ENSMUST00000225043 1548 ntBASIC22.98■■□□□ 1.27
Cspg4Q8VHY0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.97■■□□□ 1.27
Cspg4Q8VHY0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cspg4Q8VHY0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cspg4Q8VHY0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cspg4Q8VHY0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.95■■□□□ 1.26
Cspg4Q8VHY0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.95■■□□□ 1.26
Cspg4Q8VHY0 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.93■■□□□ 1.26
Cspg4Q8VHY0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cspg4Q8VHY0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cspg4Q8VHY0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.89■■□□□ 1.26
Cspg4Q8VHY0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Cspg4Q8VHY0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.85■■□□□ 1.25
Cspg4Q8VHY0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.84■■□□□ 1.25
Cspg4Q8VHY0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cspg4Q8VHY0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Cspg4Q8VHY0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg4Q8VHY0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cspg4Q8VHY0 Gm24970-201ENSMUST00000175582 82 ntBASIC22.77■■□□□ 1.24
Cspg4Q8VHY0 Gm6821-201ENSMUST00000107540 542 ntBASIC22.75■■□□□ 1.23
Cspg4Q8VHY0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cspg4Q8VHY0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cspg4Q8VHY0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cspg4Q8VHY0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.68■■□□□ 1.22
Cspg4Q8VHY0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg4Q8VHY0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cspg4Q8VHY0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.66■■□□□ 1.22
Cspg4Q8VHY0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.65■■□□□ 1.22
Cspg4Q8VHY0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.65■■□□□ 1.22
Cspg4Q8VHY0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Cspg4Q8VHY0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.63■■□□□ 1.21
Cspg4Q8VHY0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg4Q8VHY0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cspg4Q8VHY0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.6■■□□□ 1.21
Cspg4Q8VHY0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cspg4Q8VHY0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg4Q8VHY0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg4Q8VHY0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cspg4Q8VHY0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms