Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.55■■□□□ 1.36
Cuedc1Q8R3V6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cuedc1Q8R3V6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cuedc1Q8R3V6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cuedc1Q8R3V6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cuedc1Q8R3V6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Cuedc1Q8R3V6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cuedc1Q8R3V6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cuedc1Q8R3V6 Peli2-204ENSMUST00000226513 1320 ntBASIC23.49■■□□□ 1.35
Cuedc1Q8R3V6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.48■■□□□ 1.35
Cuedc1Q8R3V6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Cuedc1Q8R3V6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Cuedc1Q8R3V6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cuedc1Q8R3V6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cuedc1Q8R3V6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cuedc1Q8R3V6 Gm45855-201ENSMUST00000212546 880 ntBASIC23.43■■□□□ 1.34
Cuedc1Q8R3V6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cuedc1Q8R3V6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cuedc1Q8R3V6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cuedc1Q8R3V6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.41■■□□□ 1.34
Cuedc1Q8R3V6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cuedc1Q8R3V6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cuedc1Q8R3V6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Cuedc1Q8R3V6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Cuedc1Q8R3V6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.38■■□□□ 1.33
Cuedc1Q8R3V6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cuedc1Q8R3V6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cuedc1Q8R3V6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cuedc1Q8R3V6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cuedc1Q8R3V6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cuedc1Q8R3V6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cuedc1Q8R3V6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cuedc1Q8R3V6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cuedc1Q8R3V6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cuedc1Q8R3V6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cuedc1Q8R3V6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Cuedc1Q8R3V6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cuedc1Q8R3V6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cuedc1Q8R3V6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cuedc1Q8R3V6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cuedc1Q8R3V6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cuedc1Q8R3V6 Gm9397-201ENSMUST00000200125 605 ntBASIC23.2■■□□□ 1.3
Cuedc1Q8R3V6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cuedc1Q8R3V6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cuedc1Q8R3V6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cuedc1Q8R3V6 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.15■■□□□ 1.3
Cuedc1Q8R3V6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cuedc1Q8R3V6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Cuedc1Q8R3V6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cuedc1Q8R3V6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cuedc1Q8R3V6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cuedc1Q8R3V6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Cuedc1Q8R3V6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cuedc1Q8R3V6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cuedc1Q8R3V6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cuedc1Q8R3V6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cuedc1Q8R3V6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Cuedc1Q8R3V6 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.1■■□□□ 1.29
Cuedc1Q8R3V6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cuedc1Q8R3V6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cuedc1Q8R3V6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.09■■□□□ 1.29
Cuedc1Q8R3V6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cuedc1Q8R3V6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cuedc1Q8R3V6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cuedc1Q8R3V6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.06■■□□□ 1.28
Cuedc1Q8R3V6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cuedc1Q8R3V6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Cuedc1Q8R3V6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cuedc1Q8R3V6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.03■■□□□ 1.28
Cuedc1Q8R3V6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.03■■□□□ 1.28
Cuedc1Q8R3V6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cuedc1Q8R3V6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cuedc1Q8R3V6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cuedc1Q8R3V6 Mipep-204ENSMUST00000225043 1548 ntBASIC23.01■■□□□ 1.27
Cuedc1Q8R3V6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cuedc1Q8R3V6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cuedc1Q8R3V6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Cuedc1Q8R3V6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.99■■□□□ 1.27
Cuedc1Q8R3V6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cuedc1Q8R3V6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cuedc1Q8R3V6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cuedc1Q8R3V6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cuedc1Q8R3V6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Cuedc1Q8R3V6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.96■■□□□ 1.27
Cuedc1Q8R3V6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.95■■□□□ 1.26
Cuedc1Q8R3V6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cuedc1Q8R3V6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.94■■□□□ 1.26
Cuedc1Q8R3V6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.93■■□□□ 1.26
Cuedc1Q8R3V6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cuedc1Q8R3V6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cuedc1Q8R3V6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.92■■□□□ 1.26
Cuedc1Q8R3V6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.91■■□□□ 1.26
Cuedc1Q8R3V6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cuedc1Q8R3V6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cuedc1Q8R3V6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms