Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Vopp1Q8R1C3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Vopp1Q8R1C3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Vopp1Q8R1C3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Vopp1Q8R1C3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Vopp1Q8R1C3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Vopp1Q8R1C3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Vopp1Q8R1C3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Vopp1Q8R1C3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Vopp1Q8R1C3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.87■■■□□ 2.21
Vopp1Q8R1C3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Vopp1Q8R1C3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Vopp1Q8R1C3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Vopp1Q8R1C3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Vopp1Q8R1C3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.83■■■□□ 2.21
Vopp1Q8R1C3 Gm16148-201ENSMUST00000119653 893 ntBASIC28.82■■■□□ 2.2
Vopp1Q8R1C3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Vopp1Q8R1C3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Vopp1Q8R1C3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.8■■■□□ 2.2
Vopp1Q8R1C3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Vopp1Q8R1C3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.79■■■□□ 2.2
Vopp1Q8R1C3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Vopp1Q8R1C3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Vopp1Q8R1C3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Vopp1Q8R1C3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
Vopp1Q8R1C3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Vopp1Q8R1C3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vopp1Q8R1C3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Vopp1Q8R1C3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Vopp1Q8R1C3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Vopp1Q8R1C3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.58■■■□□ 2.17
Vopp1Q8R1C3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vopp1Q8R1C3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vopp1Q8R1C3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Vopp1Q8R1C3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Vopp1Q8R1C3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Vopp1Q8R1C3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Vopp1Q8R1C3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Vopp1Q8R1C3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.52■■■□□ 2.16
Vopp1Q8R1C3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Vopp1Q8R1C3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.49■■■□□ 2.15
Vopp1Q8R1C3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Vopp1Q8R1C3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Vopp1Q8R1C3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Vopp1Q8R1C3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Vopp1Q8R1C3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Vopp1Q8R1C3 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.43■■■□□ 2.14
Vopp1Q8R1C3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.43■■■□□ 2.14
Vopp1Q8R1C3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.42■■■□□ 2.14
Vopp1Q8R1C3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Vopp1Q8R1C3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Vopp1Q8R1C3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Vopp1Q8R1C3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
Vopp1Q8R1C3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Vopp1Q8R1C3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.37■■■□□ 2.13
Vopp1Q8R1C3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Vopp1Q8R1C3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Vopp1Q8R1C3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.35■■■□□ 2.13
Vopp1Q8R1C3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Vopp1Q8R1C3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Vopp1Q8R1C3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Vopp1Q8R1C3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vopp1Q8R1C3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vopp1Q8R1C3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vopp1Q8R1C3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Vopp1Q8R1C3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
Vopp1Q8R1C3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Vopp1Q8R1C3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Vopp1Q8R1C3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Vopp1Q8R1C3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.24■■■□□ 2.11
Vopp1Q8R1C3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Vopp1Q8R1C3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.24■■■□□ 2.11
Vopp1Q8R1C3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Vopp1Q8R1C3 Gm9397-201ENSMUST00000200125 605 ntBASIC28.2■■■□□ 2.1
Vopp1Q8R1C3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vopp1Q8R1C3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.17■■■□□ 2.1
Vopp1Q8R1C3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vopp1Q8R1C3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.16■■■□□ 2.1
Vopp1Q8R1C3 Gm45855-201ENSMUST00000212546 880 ntBASIC28.15■■■□□ 2.1
Vopp1Q8R1C3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Vopp1Q8R1C3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Vopp1Q8R1C3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Vopp1Q8R1C3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.12■■■□□ 2.09
Vopp1Q8R1C3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Vopp1Q8R1C3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vopp1Q8R1C3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
Vopp1Q8R1C3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Vopp1Q8R1C3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Vopp1Q8R1C3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.08■■■□□ 2.09
Vopp1Q8R1C3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Vopp1Q8R1C3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.08■■■□□ 2.09
Vopp1Q8R1C3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Vopp1Q8R1C3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
Vopp1Q8R1C3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Vopp1Q8R1C3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Vopp1Q8R1C3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Vopp1Q8R1C3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Vopp1Q8R1C3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Vopp1Q8R1C3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Vopp1Q8R1C3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms