Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC38,23■■■■□ 3,71
Abca8aQ8K442 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC38,22■■■■□ 3,71
Abca8aQ8K442 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC38,21■■■■□ 3,71
Abca8aQ8K442 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC38,17■■■■□ 3,7
Abca8aQ8K442 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC38,13■■■■□ 3,69
Abca8aQ8K442 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC38,12■■■■□ 3,69
Abca8aQ8K442 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC38,08■■■■□ 3,69
Abca8aQ8K442 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC38,08■■■■□ 3,69
Abca8aQ8K442 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC38,08■■■■□ 3,69
Abca8aQ8K442 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC38,05■■■■□ 3,68
Abca8aQ8K442 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC38,05■■■■□ 3,68
Abca8aQ8K442 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC38,04■■■■□ 3,68
Abca8aQ8K442 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC38,01■■■■□ 3,68
Abca8aQ8K442 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC38,01■■■■□ 3,68
Abca8aQ8K442 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3,67
Abca8aQ8K442 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC37,97■■■■□ 3,67
Abca8aQ8K442 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC37,93■■■■□ 3,66
Abca8aQ8K442 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC37,93■■■■□ 3,66
Abca8aQ8K442 Tdp2-203ENSMUST00000223804 1136 ntBASIC37,9■■■■□ 3,66
Abca8aQ8K442 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC37,88■■■■□ 3,65
Abca8aQ8K442 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC37,87■■■■□ 3,65
Abca8aQ8K442 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC37,86■■■■□ 3,65
Abca8aQ8K442 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC37,85■■■■□ 3,65
Abca8aQ8K442 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC37,83■■■■□ 3,65
Abca8aQ8K442 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC37,83■■■■□ 3,65
Abca8aQ8K442 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC37,74■■■■□ 3,63
Abca8aQ8K442 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC37,72■■■■□ 3,63
Abca8aQ8K442 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC37,7■■■■□ 3,63
Abca8aQ8K442 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC37,69■■■■□ 3,62
Abca8aQ8K442 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC37,69■■■■□ 3,62
Abca8aQ8K442 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC37,67■■■■□ 3,62
Abca8aQ8K442 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC37,66■■■■□ 3,62
Abca8aQ8K442 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC37,66■■■■□ 3,62
Abca8aQ8K442 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC37,65■■■■□ 3,62
Abca8aQ8K442 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC37,61■■■■□ 3,61
Abca8aQ8K442 Gm9397-201ENSMUST00000200125 605 ntBASIC37,61■■■■□ 3,61
Abca8aQ8K442 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC37,58■■■■□ 3,61
Abca8aQ8K442 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC37,58■■■■□ 3,61
Abca8aQ8K442 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC37,57■■■■□ 3,61
Abca8aQ8K442 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC37,56■■■■□ 3,6
Abca8aQ8K442 Gm45855-201ENSMUST00000212546 880 ntBASIC37,55■■■■□ 3,6
Abca8aQ8K442 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC37,54■■■■□ 3,6
Abca8aQ8K442 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC37,54■■■■□ 3,6
Abca8aQ8K442 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC37,52■■■■□ 3,6
Abca8aQ8K442 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC37,52■■■■□ 3,6
Abca8aQ8K442 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC37,49■■■■□ 3,59
Abca8aQ8K442 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC37,49■■■■□ 3,59
Abca8aQ8K442 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC37,49■■■■□ 3,59
Abca8aQ8K442 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC37,49■■■■□ 3,59
Abca8aQ8K442 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC37,49■■■■□ 3,59
Abca8aQ8K442 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC37,48■■■■□ 3,59
Abca8aQ8K442 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC37,48■■■■□ 3,59
Abca8aQ8K442 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC37,47■■■■□ 3,59
Abca8aQ8K442 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC37,47■■■■□ 3,59
Abca8aQ8K442 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Abca8aQ8K442 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC37,44■■■■□ 3,58
Abca8aQ8K442 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC37,44■■■■□ 3,58
Abca8aQ8K442 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC37,42■■■■□ 3,58
Abca8aQ8K442 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC37,4■■■■□ 3,58
Abca8aQ8K442 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC37,38■■■■□ 3,57
Abca8aQ8K442 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC37,37■■■■□ 3,57
Abca8aQ8K442 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC37,36■■■■□ 3,57
Abca8aQ8K442 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC37,33■■■■□ 3,57
Abca8aQ8K442 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC37,31■■■■□ 3,56
Abca8aQ8K442 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC37,29■■■■□ 3,56
Abca8aQ8K442 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC37,25■■■■□ 3,55
Abca8aQ8K442 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC37,25■■■■□ 3,55
Abca8aQ8K442 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC37,24■■■■□ 3,55
Abca8aQ8K442 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC37,22■■■■□ 3,55
Abca8aQ8K442 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC37,21■■■■□ 3,55
Abca8aQ8K442 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC37,2■■■■□ 3,55
Abca8aQ8K442 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC37,2■■■■□ 3,55
Abca8aQ8K442 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC37,2■■■■□ 3,55
Abca8aQ8K442 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC37,19■■■■□ 3,54
Abca8aQ8K442 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Abca8aQ8K442 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Abca8aQ8K442 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Abca8aQ8K442 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Abca8aQ8K442 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC37,18■■■■□ 3,54
Abca8aQ8K442 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC37,16■■■■□ 3,54
Abca8aQ8K442 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC37,13■■■■□ 3,53
Abca8aQ8K442 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC37,12■■■■□ 3,53
Abca8aQ8K442 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC37,11■■■■□ 3,53
Abca8aQ8K442 Gm24970-201ENSMUST00000175582 82 ntBASIC37,1■■■■□ 3,53
Abca8aQ8K442 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC37,1■■■■□ 3,53
Abca8aQ8K442 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC37,07■■■■□ 3,53
Abca8aQ8K442 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC37,07■■■■□ 3,52
Abca8aQ8K442 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC37,07■■■■□ 3,52
Abca8aQ8K442 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC37,06■■■■□ 3,52
Abca8aQ8K442 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC37,06■■■■□ 3,52
Abca8aQ8K442 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
Abca8aQ8K442 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC37,05■■■■□ 3,52
Abca8aQ8K442 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
Abca8aQ8K442 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC37,03■■■■□ 3,52
Abca8aQ8K442 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC37,02■■■■□ 3,52
Abca8aQ8K442 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC37,02■■■■□ 3,52
Abca8aQ8K442 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC37■■■■□ 3,51
Abca8aQ8K442 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC36,99■■■■□ 3,51
Abca8aQ8K442 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC36,99■■■■□ 3,51
Abca8aQ8K442 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC36,99■■■■□ 3,51
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms