Protein–RNA interactions for Protein: Q8K2X2

Rbm48, RNA-binding protein 48, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm48Q8K2X2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,6■■□□□ 1,05
Rbm48Q8K2X2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21,6■■□□□ 1,05
Rbm48Q8K2X2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Rbm48Q8K2X2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21,59■■□□□ 1,05
Rbm48Q8K2X2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,59■■□□□ 1,05
Rbm48Q8K2X2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Rbm48Q8K2X2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Rbm48Q8K2X2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Rbm48Q8K2X2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Rbm48Q8K2X2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Rbm48Q8K2X2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21,53■■□□□ 1,04
Rbm48Q8K2X2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21,52■■□□□ 1,04
Rbm48Q8K2X2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Rbm48Q8K2X2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Rbm48Q8K2X2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,49■■□□□ 1,03
Rbm48Q8K2X2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21,49■■□□□ 1,03
Rbm48Q8K2X2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Rbm48Q8K2X2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Rbm48Q8K2X2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,48■■□□□ 1,03
Rbm48Q8K2X2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Rbm48Q8K2X2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21,46■■□□□ 1,03
Rbm48Q8K2X2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Rbm48Q8K2X2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Rbm48Q8K2X2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Rbm48Q8K2X2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Rbm48Q8K2X2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Rbm48Q8K2X2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Rbm48Q8K2X2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,4■■□□□ 1,02
Rbm48Q8K2X2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,39■■□□□ 1,01
Rbm48Q8K2X2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21,39■■□□□ 1,01
Rbm48Q8K2X2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21,39■■□□□ 1,01
Rbm48Q8K2X2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21,39■■□□□ 1,01
Rbm48Q8K2X2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Rbm48Q8K2X2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,35■■□□□ 1,01
Rbm48Q8K2X2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Rbm48Q8K2X2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,35■■□□□ 1,01
Rbm48Q8K2X2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21,34■■□□□ 1,01
Rbm48Q8K2X2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21,34■■□□□ 1,01
Rbm48Q8K2X2 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,32■■□□□ 1
Rbm48Q8K2X2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Rbm48Q8K2X2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21,31■■□□□ 1
Rbm48Q8K2X2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21,31■■□□□ 1
Rbm48Q8K2X2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,3■■□□□ 1
Rbm48Q8K2X2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Rbm48Q8K2X2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Rbm48Q8K2X2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21,29■■□□□ 1
Rbm48Q8K2X2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21,28■■□□□ 1
Rbm48Q8K2X2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21,28■■□□□ 1
Rbm48Q8K2X2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Rbm48Q8K2X2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21,25■□□□□ 0,99
Rbm48Q8K2X2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Rbm48Q8K2X2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Rbm48Q8K2X2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Rbm48Q8K2X2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21,21■□□□□ 0,99
Rbm48Q8K2X2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Rbm48Q8K2X2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21,21■□□□□ 0,99
Rbm48Q8K2X2 Amer2-203ENSMUST00000225247 2662 ntBASIC21,21■□□□□ 0,99
Rbm48Q8K2X2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Rbm48Q8K2X2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21,18■□□□□ 0,98
Rbm48Q8K2X2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Rbm48Q8K2X2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,17■□□□□ 0,98
Rbm48Q8K2X2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21,17■□□□□ 0,98
Rbm48Q8K2X2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Rbm48Q8K2X2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Rbm48Q8K2X2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,97
Rbm48Q8K2X2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Rbm48Q8K2X2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21,13■□□□□ 0,97
Rbm48Q8K2X2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Rbm48Q8K2X2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Rbm48Q8K2X2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21,12■□□□□ 0,97
Rbm48Q8K2X2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Rbm48Q8K2X2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21,12■□□□□ 0,97
Rbm48Q8K2X2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21,11■□□□□ 0,97
Rbm48Q8K2X2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21,1■□□□□ 0,97
Rbm48Q8K2X2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Rbm48Q8K2X2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21,09■□□□□ 0,97
Rbm48Q8K2X2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21,09■□□□□ 0,97
Rbm48Q8K2X2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Rbm48Q8K2X2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21,08■□□□□ 0,97
Rbm48Q8K2X2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21,08■□□□□ 0,96
Rbm48Q8K2X2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21,08■□□□□ 0,96
Rbm48Q8K2X2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21,08■□□□□ 0,96
Rbm48Q8K2X2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21,07■□□□□ 0,96
Rbm48Q8K2X2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21,06■□□□□ 0,96
Rbm48Q8K2X2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Rbm48Q8K2X2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21,06■□□□□ 0,96
Rbm48Q8K2X2 Gm27325-201ENSMUST00000175467 74 ntBASIC21,05■□□□□ 0,96
Rbm48Q8K2X2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Rbm48Q8K2X2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,05■□□□□ 0,96
Rbm48Q8K2X2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21,04■□□□□ 0,96
Rbm48Q8K2X2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Rbm48Q8K2X2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21,03■□□□□ 0,96
Rbm48Q8K2X2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Rbm48Q8K2X2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21,02■□□□□ 0,96
Rbm48Q8K2X2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,95
Rbm48Q8K2X2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21,02■□□□□ 0,95
Rbm48Q8K2X2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21,01■□□□□ 0,95
Rbm48Q8K2X2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21,01■□□□□ 0,95
Rbm48Q8K2X2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Rbm48Q8K2X2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Retrieved 100 of 76,532 protein–RNA pairs in 35,2 ms