Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cmtm4Q8CJ61 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cmtm4Q8CJ61 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
Cmtm4Q8CJ61 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cmtm4Q8CJ61 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cmtm4Q8CJ61 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
Cmtm4Q8CJ61 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cmtm4Q8CJ61 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.36■■□□□ 1.17
Cmtm4Q8CJ61 Gm27325-201ENSMUST00000175467 74 ntBASIC22.34■■□□□ 1.17
Cmtm4Q8CJ61 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cmtm4Q8CJ61 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cmtm4Q8CJ61 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cmtm4Q8CJ61 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.3■■□□□ 1.16
Cmtm4Q8CJ61 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cmtm4Q8CJ61 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cmtm4Q8CJ61 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cmtm4Q8CJ61 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cmtm4Q8CJ61 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cmtm4Q8CJ61 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.25■■□□□ 1.15
Cmtm4Q8CJ61 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cmtm4Q8CJ61 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cmtm4Q8CJ61 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cmtm4Q8CJ61 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cmtm4Q8CJ61 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cmtm4Q8CJ61 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cmtm4Q8CJ61 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cmtm4Q8CJ61 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cmtm4Q8CJ61 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cmtm4Q8CJ61 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cmtm4Q8CJ61 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cmtm4Q8CJ61 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cmtm4Q8CJ61 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
Cmtm4Q8CJ61 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Cmtm4Q8CJ61 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cmtm4Q8CJ61 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.13■■□□□ 1.13
Cmtm4Q8CJ61 Amer2-203ENSMUST00000225247 2662 ntBASIC22.12■■□□□ 1.13
Cmtm4Q8CJ61 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cmtm4Q8CJ61 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cmtm4Q8CJ61 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cmtm4Q8CJ61 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cmtm4Q8CJ61 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.1■■□□□ 1.13
Cmtm4Q8CJ61 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cmtm4Q8CJ61 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cmtm4Q8CJ61 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cmtm4Q8CJ61 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cmtm4Q8CJ61 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cmtm4Q8CJ61 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Cmtm4Q8CJ61 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.07■■□□□ 1.12
Cmtm4Q8CJ61 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cmtm4Q8CJ61 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cmtm4Q8CJ61 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cmtm4Q8CJ61 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cmtm4Q8CJ61 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cmtm4Q8CJ61 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cmtm4Q8CJ61 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cmtm4Q8CJ61 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cmtm4Q8CJ61 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22■■□□□ 1.11
Cmtm4Q8CJ61 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cmtm4Q8CJ61 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Cmtm4Q8CJ61 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cmtm4Q8CJ61 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cmtm4Q8CJ61 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.98■■□□□ 1.11
Cmtm4Q8CJ61 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cmtm4Q8CJ61 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cmtm4Q8CJ61 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cmtm4Q8CJ61 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cmtm4Q8CJ61 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.94■■□□□ 1.1
Cmtm4Q8CJ61 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Cmtm4Q8CJ61 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.94■■□□□ 1.1
Cmtm4Q8CJ61 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.94■■□□□ 1.1
Cmtm4Q8CJ61 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cmtm4Q8CJ61 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cmtm4Q8CJ61 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cmtm4Q8CJ61 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.9■■□□□ 1.1
Cmtm4Q8CJ61 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cmtm4Q8CJ61 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cmtm4Q8CJ61 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cmtm4Q8CJ61 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cmtm4Q8CJ61 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cmtm4Q8CJ61 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cmtm4Q8CJ61 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cmtm4Q8CJ61 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cmtm4Q8CJ61 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cmtm4Q8CJ61 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Cmtm4Q8CJ61 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cmtm4Q8CJ61 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.79■■□□□ 1.08
Cmtm4Q8CJ61 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cmtm4Q8CJ61 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cmtm4Q8CJ61 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cmtm4Q8CJ61 Rab21-202ENSMUST00000218831 843 ntBASIC21.74■■□□□ 1.07
Cmtm4Q8CJ61 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cmtm4Q8CJ61 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cmtm4Q8CJ61 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.73■■□□□ 1.07
Cmtm4Q8CJ61 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cmtm4Q8CJ61 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 632 ms