Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Trpm6Q8CIR4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trpm6Q8CIR4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Trpm6Q8CIR4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Trpm6Q8CIR4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Trpm6Q8CIR4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trpm6Q8CIR4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.01■■□□□ 1.91
Trpm6Q8CIR4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
Trpm6Q8CIR4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Trpm6Q8CIR4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trpm6Q8CIR4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trpm6Q8CIR4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Trpm6Q8CIR4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.97■■□□□ 1.91
Trpm6Q8CIR4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trpm6Q8CIR4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trpm6Q8CIR4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trpm6Q8CIR4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trpm6Q8CIR4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trpm6Q8CIR4 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.95■■□□□ 1.91
Trpm6Q8CIR4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trpm6Q8CIR4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trpm6Q8CIR4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Trpm6Q8CIR4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trpm6Q8CIR4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.94■■□□□ 1.9
Trpm6Q8CIR4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.9■■□□□ 1.9
Trpm6Q8CIR4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trpm6Q8CIR4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Trpm6Q8CIR4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trpm6Q8CIR4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trpm6Q8CIR4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trpm6Q8CIR4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trpm6Q8CIR4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Trpm6Q8CIR4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Trpm6Q8CIR4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.73■■□□□ 1.87
Trpm6Q8CIR4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.73■■□□□ 1.87
Trpm6Q8CIR4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.72■■□□□ 1.87
Trpm6Q8CIR4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trpm6Q8CIR4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.7■■□□□ 1.87
Trpm6Q8CIR4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trpm6Q8CIR4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trpm6Q8CIR4 Gm45855-201ENSMUST00000212546 880 ntBASIC26.68■■□□□ 1.86
Trpm6Q8CIR4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trpm6Q8CIR4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Trpm6Q8CIR4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trpm6Q8CIR4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Trpm6Q8CIR4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trpm6Q8CIR4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trpm6Q8CIR4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trpm6Q8CIR4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trpm6Q8CIR4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trpm6Q8CIR4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trpm6Q8CIR4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.6■■□□□ 1.85
Trpm6Q8CIR4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Trpm6Q8CIR4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.55■■□□□ 1.84
Trpm6Q8CIR4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Trpm6Q8CIR4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trpm6Q8CIR4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trpm6Q8CIR4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.51■■□□□ 1.83
Trpm6Q8CIR4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
Trpm6Q8CIR4 Gm9397-201ENSMUST00000200125 605 ntBASIC26.51■■□□□ 1.83
Trpm6Q8CIR4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trpm6Q8CIR4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trpm6Q8CIR4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Trpm6Q8CIR4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trpm6Q8CIR4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trpm6Q8CIR4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trpm6Q8CIR4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
Trpm6Q8CIR4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.44■■□□□ 1.82
Trpm6Q8CIR4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trpm6Q8CIR4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.41■■□□□ 1.82
Trpm6Q8CIR4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trpm6Q8CIR4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Trpm6Q8CIR4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trpm6Q8CIR4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Trpm6Q8CIR4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.38■■□□□ 1.81
Trpm6Q8CIR4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.37■■□□□ 1.81
Trpm6Q8CIR4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
Trpm6Q8CIR4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trpm6Q8CIR4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trpm6Q8CIR4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trpm6Q8CIR4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trpm6Q8CIR4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trpm6Q8CIR4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trpm6Q8CIR4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trpm6Q8CIR4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trpm6Q8CIR4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trpm6Q8CIR4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Trpm6Q8CIR4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.29■■□□□ 1.8
Trpm6Q8CIR4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trpm6Q8CIR4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trpm6Q8CIR4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Trpm6Q8CIR4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trpm6Q8CIR4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trpm6Q8CIR4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trpm6Q8CIR4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms