Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Crlf2Q8CII9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,63■■■□□ 2,33
Crlf2Q8CII9 Gm9397-201ENSMUST00000200125 605 ntBASIC29,63■■■□□ 2,33
Crlf2Q8CII9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Crlf2Q8CII9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Crlf2Q8CII9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29,61■■■□□ 2,33
Crlf2Q8CII9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29,6■■■□□ 2,33
Crlf2Q8CII9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Crlf2Q8CII9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29,58■■■□□ 2,33
Crlf2Q8CII9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29,55■■■□□ 2,32
Crlf2Q8CII9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Crlf2Q8CII9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,53■■■□□ 2,32
Crlf2Q8CII9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29,52■■■□□ 2,32
Crlf2Q8CII9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29,51■■■□□ 2,31
Crlf2Q8CII9 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,5■■■□□ 2,31
Crlf2Q8CII9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
Crlf2Q8CII9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Crlf2Q8CII9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Crlf2Q8CII9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
Crlf2Q8CII9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Crlf2Q8CII9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29,45■■■□□ 2,31
Crlf2Q8CII9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,43■■■□□ 2,3
Crlf2Q8CII9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29,41■■■□□ 2,3
Crlf2Q8CII9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29,4■■■□□ 2,3
Crlf2Q8CII9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29,39■■■□□ 2,3
Crlf2Q8CII9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
Crlf2Q8CII9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,34■■■□□ 2,29
Crlf2Q8CII9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29,33■■■□□ 2,29
Crlf2Q8CII9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29,32■■■□□ 2,28
Crlf2Q8CII9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,31■■■□□ 2,28
Crlf2Q8CII9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Crlf2Q8CII9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29,3■■■□□ 2,28
Crlf2Q8CII9 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,3■■■□□ 2,28
Crlf2Q8CII9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Crlf2Q8CII9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29,26■■■□□ 2,27
Crlf2Q8CII9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Crlf2Q8CII9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Crlf2Q8CII9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Crlf2Q8CII9 Gm8503-201ENSMUST00000118131 455 ntBASIC29,22■■■□□ 2,27
Crlf2Q8CII9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29,21■■■□□ 2,27
Crlf2Q8CII9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29,2■■■□□ 2,26
Crlf2Q8CII9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Crlf2Q8CII9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29,18■■■□□ 2,26
Crlf2Q8CII9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Crlf2Q8CII9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29,12■■■□□ 2,25
Crlf2Q8CII9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
Crlf2Q8CII9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Crlf2Q8CII9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Crlf2Q8CII9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,06■■■□□ 2,24
Crlf2Q8CII9 Gm6821-201ENSMUST00000107540 542 ntBASIC29,06■■■□□ 2,24
Crlf2Q8CII9 Gm24970-201ENSMUST00000175582 82 ntBASIC29,04■■■□□ 2,24
Crlf2Q8CII9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,02■■■□□ 2,24
Crlf2Q8CII9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29,02■■■□□ 2,24
Crlf2Q8CII9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29,01■■■□□ 2,23
Crlf2Q8CII9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Crlf2Q8CII9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28,99■■■□□ 2,23
Crlf2Q8CII9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28,94■■■□□ 2,22
Crlf2Q8CII9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Crlf2Q8CII9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Crlf2Q8CII9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28,93■■■□□ 2,22
Crlf2Q8CII9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,21
Crlf2Q8CII9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
Crlf2Q8CII9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,87■■■□□ 2,21
Crlf2Q8CII9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28,86■■■□□ 2,21
Crlf2Q8CII9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Crlf2Q8CII9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,82■■■□□ 2,2
Crlf2Q8CII9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,2
Crlf2Q8CII9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28,75■■■□□ 2,19
Crlf2Q8CII9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Crlf2Q8CII9 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,71■■■□□ 2,19
Crlf2Q8CII9 Mipep-204ENSMUST00000225043 1548 ntBASIC28,7■■■□□ 2,19
Crlf2Q8CII9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,68■■■□□ 2,18
Crlf2Q8CII9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,68■■■□□ 2,18
Crlf2Q8CII9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28,68■■■□□ 2,18
Crlf2Q8CII9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Crlf2Q8CII9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28,65■■■□□ 2,18
Crlf2Q8CII9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Crlf2Q8CII9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28,59■■■□□ 2,17
Crlf2Q8CII9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Crlf2Q8CII9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,54■■■□□ 2,16
Crlf2Q8CII9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28,52■■■□□ 2,16
Crlf2Q8CII9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28,52■■■□□ 2,16
Crlf2Q8CII9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28,51■■■□□ 2,15
Crlf2Q8CII9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28,5■■■□□ 2,15
Crlf2Q8CII9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28,49■■■□□ 2,15
Crlf2Q8CII9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,48■■■□□ 2,15
Crlf2Q8CII9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,47■■■□□ 2,15
Crlf2Q8CII9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Crlf2Q8CII9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28,44■■■□□ 2,14
Crlf2Q8CII9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28,44■■■□□ 2,14
Crlf2Q8CII9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28,44■■■□□ 2,14
Crlf2Q8CII9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Crlf2Q8CII9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Crlf2Q8CII9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Crlf2Q8CII9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28,41■■■□□ 2,14
Retrieved 100 of 76,532 protein–RNA pairs in 22,2 ms