Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rsph6aQ8CDR2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rsph6aQ8CDR2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rsph6aQ8CDR2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rsph6aQ8CDR2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Rsph6aQ8CDR2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.2
Rsph6aQ8CDR2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Rsph6aQ8CDR2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rsph6aQ8CDR2 Gm16148-201ENSMUST00000119653 893 ntBASIC35.01■■■■□ 3.2
Rsph6aQ8CDR2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rsph6aQ8CDR2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35■■■■□ 3.19
Rsph6aQ8CDR2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Rsph6aQ8CDR2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rsph6aQ8CDR2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.99■■■■□ 3.19
Rsph6aQ8CDR2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rsph6aQ8CDR2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Rsph6aQ8CDR2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Rsph6aQ8CDR2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rsph6aQ8CDR2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rsph6aQ8CDR2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34.9■■■■□ 3.18
Rsph6aQ8CDR2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC34.9■■■■□ 3.18
Rsph6aQ8CDR2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rsph6aQ8CDR2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Rsph6aQ8CDR2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC34.84■■■■□ 3.17
Rsph6aQ8CDR2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
Rsph6aQ8CDR2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.79■■■■□ 3.16
Rsph6aQ8CDR2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Rsph6aQ8CDR2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rsph6aQ8CDR2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Rsph6aQ8CDR2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Rsph6aQ8CDR2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Rsph6aQ8CDR2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.68■■■■□ 3.14
Rsph6aQ8CDR2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rsph6aQ8CDR2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC34.68■■■■□ 3.14
Rsph6aQ8CDR2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
Rsph6aQ8CDR2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Rsph6aQ8CDR2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Rsph6aQ8CDR2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Rsph6aQ8CDR2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Rsph6aQ8CDR2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Rsph6aQ8CDR2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34.59■■■■□ 3.13
Rsph6aQ8CDR2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Rsph6aQ8CDR2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC34.54■■■■□ 3.12
Rsph6aQ8CDR2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC34.54■■■■□ 3.12
Rsph6aQ8CDR2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34.54■■■■□ 3.12
Rsph6aQ8CDR2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC34.47■■■■□ 3.11
Rsph6aQ8CDR2 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.46■■■■□ 3.11
Rsph6aQ8CDR2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.44■■■■□ 3.1
Rsph6aQ8CDR2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Rsph6aQ8CDR2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Rsph6aQ8CDR2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Rsph6aQ8CDR2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Rsph6aQ8CDR2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
Rsph6aQ8CDR2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Rsph6aQ8CDR2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Rsph6aQ8CDR2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Rsph6aQ8CDR2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC34.37■■■■□ 3.09
Rsph6aQ8CDR2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rsph6aQ8CDR2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC34.36■■■■□ 3.09
Rsph6aQ8CDR2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rsph6aQ8CDR2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rsph6aQ8CDR2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rsph6aQ8CDR2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rsph6aQ8CDR2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Rsph6aQ8CDR2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rsph6aQ8CDR2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
Rsph6aQ8CDR2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC34.31■■■■□ 3.08
Rsph6aQ8CDR2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rsph6aQ8CDR2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rsph6aQ8CDR2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rsph6aQ8CDR2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Rsph6aQ8CDR2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34.23■■■■□ 3.07
Rsph6aQ8CDR2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Rsph6aQ8CDR2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Rsph6aQ8CDR2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Rsph6aQ8CDR2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Rsph6aQ8CDR2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Rsph6aQ8CDR2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC34.18■■■■□ 3.06
Rsph6aQ8CDR2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Rsph6aQ8CDR2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Rsph6aQ8CDR2 Gm45855-201ENSMUST00000212546 880 ntBASIC34.13■■■■□ 3.05
Rsph6aQ8CDR2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC34.13■■■■□ 3.05
Rsph6aQ8CDR2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Rsph6aQ8CDR2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Rsph6aQ8CDR2 Gm9397-201ENSMUST00000200125 605 ntBASIC34.12■■■■□ 3.05
Rsph6aQ8CDR2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rsph6aQ8CDR2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
Rsph6aQ8CDR2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Rsph6aQ8CDR2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Rsph6aQ8CDR2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC34.05■■■■□ 3.04
Rsph6aQ8CDR2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Rsph6aQ8CDR2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Rsph6aQ8CDR2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC34.04■■■■□ 3.04
Rsph6aQ8CDR2 Gm2415-204ENSMUST00000190235 2004 ntBASIC34.03■■■■□ 3.04
Rsph6aQ8CDR2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34.03■■■■□ 3.04
Rsph6aQ8CDR2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
Rsph6aQ8CDR2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC34.02■■■■□ 3.04
Rsph6aQ8CDR2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC34.01■■■■□ 3.03
Rsph6aQ8CDR2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC34■■■■□ 3.03
Rsph6aQ8CDR2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms