Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zim1Q8C393 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Zim1Q8C393 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Zim1Q8C393 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Zim1Q8C393 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zim1Q8C393 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zim1Q8C393 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zim1Q8C393 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Zim1Q8C393 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Zim1Q8C393 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Zim1Q8C393 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Zim1Q8C393 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Zim1Q8C393 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.48■■□□□ 1.03
Zim1Q8C393 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.47■■□□□ 1.03
Zim1Q8C393 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zim1Q8C393 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zim1Q8C393 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zim1Q8C393 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.43■■□□□ 1.02
Zim1Q8C393 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.42■■□□□ 1.02
Zim1Q8C393 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zim1Q8C393 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zim1Q8C393 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Zim1Q8C393 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zim1Q8C393 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Zim1Q8C393 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zim1Q8C393 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zim1Q8C393 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zim1Q8C393 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.33■■□□□ 1
Zim1Q8C393 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zim1Q8C393 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zim1Q8C393 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Zim1Q8C393 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.29■■□□□ 1
Zim1Q8C393 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zim1Q8C393 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zim1Q8C393 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Zim1Q8C393 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Zim1Q8C393 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zim1Q8C393 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.26■□□□□ 0.99
Zim1Q8C393 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Zim1Q8C393 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zim1Q8C393 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zim1Q8C393 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.21■□□□□ 0.99
Zim1Q8C393 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zim1Q8C393 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zim1Q8C393 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zim1Q8C393 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zim1Q8C393 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zim1Q8C393 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zim1Q8C393 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zim1Q8C393 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zim1Q8C393 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zim1Q8C393 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Zim1Q8C393 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.11■□□□□ 0.97
Zim1Q8C393 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zim1Q8C393 Mipep-204ENSMUST00000225043 1548 ntBASIC21.09■□□□□ 0.97
Zim1Q8C393 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Zim1Q8C393 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zim1Q8C393 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Zim1Q8C393 Gm24804-201ENSMUST00000174982 85 ntBASIC21.07■□□□□ 0.96
Zim1Q8C393 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zim1Q8C393 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.06■□□□□ 0.96
Zim1Q8C393 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zim1Q8C393 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zim1Q8C393 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zim1Q8C393 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zim1Q8C393 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zim1Q8C393 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zim1Q8C393 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zim1Q8C393 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Zim1Q8C393 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zim1Q8C393 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Zim1Q8C393 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Zim1Q8C393 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zim1Q8C393 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zim1Q8C393 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zim1Q8C393 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zim1Q8C393 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Zim1Q8C393 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zim1Q8C393 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zim1Q8C393 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Zim1Q8C393 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zim1Q8C393 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.94■□□□□ 0.94
Zim1Q8C393 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zim1Q8C393 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Zim1Q8C393 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Zim1Q8C393 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zim1Q8C393 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Zim1Q8C393 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zim1Q8C393 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zim1Q8C393 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zim1Q8C393 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.89■□□□□ 0.93
Zim1Q8C393 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zim1Q8C393 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Zim1Q8C393 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Zim1Q8C393 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zim1Q8C393 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zim1Q8C393 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.87■□□□□ 0.93
Zim1Q8C393 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Zim1Q8C393 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Zim1Q8C393 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms