Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC37.26■■■■□ 3.55
Cps1Q8C196 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Cps1Q8C196 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC37.23■■■■□ 3.55
Cps1Q8C196 Mipep-204ENSMUST00000225043 1548 ntBASIC37.22■■■■□ 3.55
Cps1Q8C196 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC37.2■■■■□ 3.55
Cps1Q8C196 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Cps1Q8C196 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC37.19■■■■□ 3.54
Cps1Q8C196 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC37.16■■■■□ 3.54
Cps1Q8C196 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC37.13■■■■□ 3.53
Cps1Q8C196 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC37.12■■■■□ 3.53
Cps1Q8C196 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC37.11■■■■□ 3.53
Cps1Q8C196 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC37.11■■■■□ 3.53
Cps1Q8C196 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
Cps1Q8C196 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC37.09■■■■□ 3.53
Cps1Q8C196 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC37.03■■■■□ 3.52
Cps1Q8C196 Gm45855-201ENSMUST00000212546 880 ntBASIC37.02■■■■□ 3.52
Cps1Q8C196 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Cps1Q8C196 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Cps1Q8C196 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Cps1Q8C196 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC37■■■■□ 3.51
Cps1Q8C196 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
Cps1Q8C196 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Cps1Q8C196 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Cps1Q8C196 Gm9397-201ENSMUST00000200125 605 ntBASIC36.96■■■■□ 3.51
Cps1Q8C196 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Cps1Q8C196 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Cps1Q8C196 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC36.93■■■■□ 3.5
Cps1Q8C196 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC36.93■■■■□ 3.5
Cps1Q8C196 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Cps1Q8C196 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
Cps1Q8C196 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Cps1Q8C196 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC36.84■■■■□ 3.49
Cps1Q8C196 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Cps1Q8C196 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Cps1Q8C196 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Cps1Q8C196 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Cps1Q8C196 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC36.78■■■■□ 3.48
Cps1Q8C196 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC36.77■■■■□ 3.48
Cps1Q8C196 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Cps1Q8C196 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC36.72■■■■□ 3.47
Cps1Q8C196 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Cps1Q8C196 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
Cps1Q8C196 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Cps1Q8C196 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Cps1Q8C196 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Cps1Q8C196 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Cps1Q8C196 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Cps1Q8C196 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC36.62■■■■□ 3.45
Cps1Q8C196 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC36.6■■■■□ 3.45
Cps1Q8C196 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
Cps1Q8C196 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC36.59■■■■□ 3.45
Cps1Q8C196 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC36.58■■■■□ 3.45
Cps1Q8C196 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
Cps1Q8C196 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Cps1Q8C196 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Cps1Q8C196 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC36.56■■■■□ 3.44
Cps1Q8C196 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Cps1Q8C196 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
Cps1Q8C196 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Cps1Q8C196 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Cps1Q8C196 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
Cps1Q8C196 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
Cps1Q8C196 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC36.47■■■■□ 3.43
Cps1Q8C196 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Cps1Q8C196 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Cps1Q8C196 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
Cps1Q8C196 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC36.44■■■■□ 3.42
Cps1Q8C196 Gm24970-201ENSMUST00000175582 82 ntBASIC36.43■■■■□ 3.42
Cps1Q8C196 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC36.41■■■■□ 3.42
Cps1Q8C196 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Cps1Q8C196 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC36.4■■■■□ 3.42
Cps1Q8C196 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC36.37■■■■□ 3.41
Cps1Q8C196 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Cps1Q8C196 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC36.36■■■■□ 3.41
Cps1Q8C196 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC36.36■■■■□ 3.41
Cps1Q8C196 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC36.35■■■■□ 3.41
Cps1Q8C196 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Cps1Q8C196 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Cps1Q8C196 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Cps1Q8C196 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Cps1Q8C196 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC36.21■■■■□ 3.39
Cps1Q8C196 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Cps1Q8C196 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC36.2■■■■□ 3.39
Cps1Q8C196 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC36.18■■■■□ 3.38
Cps1Q8C196 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC36.17■■■■□ 3.38
Cps1Q8C196 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Cps1Q8C196 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Cps1Q8C196 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Cps1Q8C196 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.38
Cps1Q8C196 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC36.13■■■■□ 3.38
Cps1Q8C196 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Cps1Q8C196 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Cps1Q8C196 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Cps1Q8C196 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
Cps1Q8C196 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC36.08■■■■□ 3.37
Cps1Q8C196 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC36.06■■■■□ 3.36
Cps1Q8C196 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Cps1Q8C196 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Cps1Q8C196 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC36.03■■■■□ 3.36
Cps1Q8C196 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms