Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ubr3Q5U430 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.88■■■■□ 3.01
Ubr3Q5U430 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ubr3Q5U430 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ubr3Q5U430 Gm45855-201ENSMUST00000212546 880 ntBASIC33.82■■■■□ 3
Ubr3Q5U430 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.81■■■■□ 3
Ubr3Q5U430 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.78■■■■□ 3
Ubr3Q5U430 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.76■■■■□ 3
Ubr3Q5U430 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Ubr3Q5U430 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Ubr3Q5U430 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Ubr3Q5U430 Gm9397-201ENSMUST00000200125 605 ntBASIC33.65■■■□□ 2.98
Ubr3Q5U430 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ubr3Q5U430 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
Ubr3Q5U430 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Ubr3Q5U430 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Ubr3Q5U430 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.62■■■□□ 2.97
Ubr3Q5U430 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
Ubr3Q5U430 Mipep-204ENSMUST00000225043 1548 ntBASIC33.56■■■□□ 2.96
Ubr3Q5U430 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Ubr3Q5U430 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.52■■■□□ 2.96
Ubr3Q5U430 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
Ubr3Q5U430 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ubr3Q5U430 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ubr3Q5U430 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.48■■■□□ 2.95
Ubr3Q5U430 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ubr3Q5U430 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Ubr3Q5U430 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
Ubr3Q5U430 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Ubr3Q5U430 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ubr3Q5U430 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ubr3Q5U430 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ubr3Q5U430 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Ubr3Q5U430 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.42■■■□□ 2.94
Ubr3Q5U430 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ubr3Q5U430 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.4■■■□□ 2.94
Ubr3Q5U430 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Ubr3Q5U430 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.4■■■□□ 2.94
Ubr3Q5U430 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.39■■■□□ 2.94
Ubr3Q5U430 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.39■■■□□ 2.94
Ubr3Q5U430 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ubr3Q5U430 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Ubr3Q5U430 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
Ubr3Q5U430 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ubr3Q5U430 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ubr3Q5U430 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.93
Ubr3Q5U430 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.32■■■□□ 2.92
Ubr3Q5U430 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Ubr3Q5U430 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.31■■■□□ 2.92
Ubr3Q5U430 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ubr3Q5U430 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.22■■■□□ 2.91
Ubr3Q5U430 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.22■■■□□ 2.91
Ubr3Q5U430 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Ubr3Q5U430 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.21■■■□□ 2.91
Ubr3Q5U430 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.17■■■□□ 2.9
Ubr3Q5U430 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Ubr3Q5U430 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Ubr3Q5U430 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.15■■■□□ 2.9
Ubr3Q5U430 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
Ubr3Q5U430 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Ubr3Q5U430 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ubr3Q5U430 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.1■■■□□ 2.89
Ubr3Q5U430 Gm24970-201ENSMUST00000175582 82 ntBASIC33.1■■■□□ 2.89
Ubr3Q5U430 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.08■■■□□ 2.89
Ubr3Q5U430 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Ubr3Q5U430 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Ubr3Q5U430 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Ubr3Q5U430 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC33.01■■■□□ 2.87
Ubr3Q5U430 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Ubr3Q5U430 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.99■■■□□ 2.87
Ubr3Q5U430 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ubr3Q5U430 Gm8503-201ENSMUST00000118131 455 ntBASIC32.86■■■□□ 2.85
Ubr3Q5U430 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.86■■■□□ 2.85
Ubr3Q5U430 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ubr3Q5U430 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.85■■■□□ 2.85
Ubr3Q5U430 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.84■■■□□ 2.85
Ubr3Q5U430 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Ubr3Q5U430 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.83■■■□□ 2.85
Ubr3Q5U430 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ubr3Q5U430 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ubr3Q5U430 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.79■■■□□ 2.84
Ubr3Q5U430 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.79■■■□□ 2.84
Ubr3Q5U430 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ubr3Q5U430 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Ubr3Q5U430 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Ubr3Q5U430 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Ubr3Q5U430 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Ubr3Q5U430 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ubr3Q5U430 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
Ubr3Q5U430 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Ubr3Q5U430 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ubr3Q5U430 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Ubr3Q5U430 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ubr3Q5U430 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Ubr3Q5U430 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ubr3Q5U430 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.67■■■□□ 2.82
Ubr3Q5U430 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ubr3Q5U430 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
Ubr3Q5U430 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ubr3Q5U430 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms