Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rnf43Q5NCP0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rnf43Q5NCP0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.22■■□□□ 1.95
Rnf43Q5NCP0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf43Q5NCP0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rnf43Q5NCP0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rnf43Q5NCP0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.16■■□□□ 1.94
Rnf43Q5NCP0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rnf43Q5NCP0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rnf43Q5NCP0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rnf43Q5NCP0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rnf43Q5NCP0 Mipep-204ENSMUST00000225043 1548 ntBASIC27.1■■□□□ 1.93
Rnf43Q5NCP0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rnf43Q5NCP0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Rnf43Q5NCP0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf43Q5NCP0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.06■■□□□ 1.92
Rnf43Q5NCP0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Rnf43Q5NCP0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.05■■□□□ 1.92
Rnf43Q5NCP0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.03■■□□□ 1.92
Rnf43Q5NCP0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf43Q5NCP0 Gm45855-201ENSMUST00000212546 880 ntBASIC27.02■■□□□ 1.92
Rnf43Q5NCP0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
Rnf43Q5NCP0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rnf43Q5NCP0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.01■■□□□ 1.91
Rnf43Q5NCP0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rnf43Q5NCP0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.97■■□□□ 1.91
Rnf43Q5NCP0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rnf43Q5NCP0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf43Q5NCP0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf43Q5NCP0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf43Q5NCP0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf43Q5NCP0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rnf43Q5NCP0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Rnf43Q5NCP0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rnf43Q5NCP0 Gm9397-201ENSMUST00000200125 605 ntBASIC26.88■■□□□ 1.89
Rnf43Q5NCP0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf43Q5NCP0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf43Q5NCP0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rnf43Q5NCP0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rnf43Q5NCP0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rnf43Q5NCP0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf43Q5NCP0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Rnf43Q5NCP0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf43Q5NCP0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf43Q5NCP0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
Rnf43Q5NCP0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Rnf43Q5NCP0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rnf43Q5NCP0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf43Q5NCP0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.73■■□□□ 1.87
Rnf43Q5NCP0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf43Q5NCP0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf43Q5NCP0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.72■■□□□ 1.87
Rnf43Q5NCP0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.7■■□□□ 1.87
Rnf43Q5NCP0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf43Q5NCP0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf43Q5NCP0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf43Q5NCP0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.69■■□□□ 1.86
Rnf43Q5NCP0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf43Q5NCP0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.67■■□□□ 1.86
Rnf43Q5NCP0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
Rnf43Q5NCP0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.66■■□□□ 1.86
Rnf43Q5NCP0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf43Q5NCP0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf43Q5NCP0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Rnf43Q5NCP0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.63■■□□□ 1.85
Rnf43Q5NCP0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf43Q5NCP0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf43Q5NCP0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf43Q5NCP0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.61■■□□□ 1.85
Rnf43Q5NCP0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf43Q5NCP0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf43Q5NCP0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf43Q5NCP0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Rnf43Q5NCP0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf43Q5NCP0 Gm24970-201ENSMUST00000175582 82 ntBASIC26.54■■□□□ 1.84
Rnf43Q5NCP0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Rnf43Q5NCP0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf43Q5NCP0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rnf43Q5NCP0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.52■■□□□ 1.84
Rnf43Q5NCP0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf43Q5NCP0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Rnf43Q5NCP0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.5■■□□□ 1.83
Rnf43Q5NCP0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rnf43Q5NCP0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf43Q5NCP0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.46■■□□□ 1.83
Rnf43Q5NCP0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Rnf43Q5NCP0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf43Q5NCP0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf43Q5NCP0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.4■■□□□ 1.82
Rnf43Q5NCP0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Rnf43Q5NCP0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rnf43Q5NCP0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf43Q5NCP0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.36■■□□□ 1.81
Rnf43Q5NCP0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Rnf43Q5NCP0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf43Q5NCP0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf43Q5NCP0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf43Q5NCP0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf43Q5NCP0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf43Q5NCP0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.32■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms