Protein–RNA interactions for Protein: Q4VAB4

Cnpy1, Protein canopy homolog 1, mousemouse

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnpy1Q4VAB4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cnpy1Q4VAB4 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.2■■□□□ 1.3
Cnpy1Q4VAB4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cnpy1Q4VAB4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cnpy1Q4VAB4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Cnpy1Q4VAB4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cnpy1Q4VAB4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Cnpy1Q4VAB4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Cnpy1Q4VAB4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cnpy1Q4VAB4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cnpy1Q4VAB4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cnpy1Q4VAB4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.06■■□□□ 1.28
Cnpy1Q4VAB4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cnpy1Q4VAB4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.03■■□□□ 1.28
Cnpy1Q4VAB4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cnpy1Q4VAB4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cnpy1Q4VAB4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Cnpy1Q4VAB4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cnpy1Q4VAB4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.97■■□□□ 1.27
Cnpy1Q4VAB4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Cnpy1Q4VAB4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.94■■□□□ 1.26
Cnpy1Q4VAB4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Cnpy1Q4VAB4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.9■■□□□ 1.26
Cnpy1Q4VAB4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cnpy1Q4VAB4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Gm24109-201ENSMUST00000175489 103 ntBASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cnpy1Q4VAB4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cnpy1Q4VAB4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Cnpy1Q4VAB4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cnpy1Q4VAB4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cnpy1Q4VAB4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Cnpy1Q4VAB4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Cnpy1Q4VAB4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cnpy1Q4VAB4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cnpy1Q4VAB4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.78■■□□□ 1.24
Cnpy1Q4VAB4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cnpy1Q4VAB4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cnpy1Q4VAB4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Gm23366-201ENSMUST00000175022 89 ntBASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.72■■□□□ 1.23
Cnpy1Q4VAB4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cnpy1Q4VAB4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.71■■□□□ 1.23
Cnpy1Q4VAB4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cnpy1Q4VAB4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cnpy1Q4VAB4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cnpy1Q4VAB4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cnpy1Q4VAB4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cnpy1Q4VAB4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cnpy1Q4VAB4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cnpy1Q4VAB4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cnpy1Q4VAB4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cnpy1Q4VAB4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cnpy1Q4VAB4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cnpy1Q4VAB4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cnpy1Q4VAB4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cnpy1Q4VAB4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cnpy1Q4VAB4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cnpy1Q4VAB4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cnpy1Q4VAB4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cnpy1Q4VAB4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.53■■□□□ 1.2
Cnpy1Q4VAB4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms