Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim9Q3V0X1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim9Q3V0X1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim9Q3V0X1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim9Q3V0X1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim9Q3V0X1 Gm27325-201ENSMUST00000175467 74 ntBASIC19.91■□□□□ 0.78
Smim9Q3V0X1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim9Q3V0X1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim9Q3V0X1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim9Q3V0X1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smim9Q3V0X1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim9Q3V0X1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.86■□□□□ 0.77
Smim9Q3V0X1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Smim9Q3V0X1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smim9Q3V0X1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim9Q3V0X1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim9Q3V0X1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim9Q3V0X1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Smim9Q3V0X1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Smim9Q3V0X1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smim9Q3V0X1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim9Q3V0X1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smim9Q3V0X1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim9Q3V0X1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim9Q3V0X1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim9Q3V0X1 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.74■□□□□ 0.75
Smim9Q3V0X1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim9Q3V0X1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim9Q3V0X1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim9Q3V0X1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim9Q3V0X1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim9Q3V0X1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.71■□□□□ 0.75
Smim9Q3V0X1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim9Q3V0X1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim9Q3V0X1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smim9Q3V0X1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim9Q3V0X1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim9Q3V0X1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim9Q3V0X1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim9Q3V0X1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smim9Q3V0X1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim9Q3V0X1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.66■□□□□ 0.74
Smim9Q3V0X1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim9Q3V0X1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim9Q3V0X1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Smim9Q3V0X1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smim9Q3V0X1 Amer2-203ENSMUST00000225247 2662 ntBASIC19.64■□□□□ 0.73
Smim9Q3V0X1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smim9Q3V0X1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smim9Q3V0X1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smim9Q3V0X1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim9Q3V0X1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Smim9Q3V0X1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim9Q3V0X1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim9Q3V0X1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smim9Q3V0X1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smim9Q3V0X1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.55■□□□□ 0.72
Smim9Q3V0X1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smim9Q3V0X1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim9Q3V0X1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim9Q3V0X1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smim9Q3V0X1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smim9Q3V0X1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smim9Q3V0X1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smim9Q3V0X1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.51■□□□□ 0.71
Smim9Q3V0X1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim9Q3V0X1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim9Q3V0X1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim9Q3V0X1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim9Q3V0X1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smim9Q3V0X1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Smim9Q3V0X1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smim9Q3V0X1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim9Q3V0X1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim9Q3V0X1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smim9Q3V0X1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim9Q3V0X1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim9Q3V0X1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smim9Q3V0X1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smim9Q3V0X1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim9Q3V0X1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
Smim9Q3V0X1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim9Q3V0X1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim9Q3V0X1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim9Q3V0X1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim9Q3V0X1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smim9Q3V0X1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smim9Q3V0X1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim9Q3V0X1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smim9Q3V0X1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim9Q3V0X1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim9Q3V0X1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim9Q3V0X1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.38■□□□□ 0.69
Smim9Q3V0X1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smim9Q3V0X1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim9Q3V0X1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim9Q3V0X1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smim9Q3V0X1 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.35■□□□□ 0.69
Smim9Q3V0X1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim9Q3V0X1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms