Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Naf1Q3UMQ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.9■■□□□ 1.9
Naf1Q3UMQ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Naf1Q3UMQ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Naf1Q3UMQ8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Naf1Q3UMQ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Naf1Q3UMQ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Naf1Q3UMQ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Naf1Q3UMQ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Naf1Q3UMQ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Naf1Q3UMQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Naf1Q3UMQ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Naf1Q3UMQ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.82■■□□□ 1.88
Naf1Q3UMQ8 Gm16148-201ENSMUST00000119653 893 ntBASIC26.8■■□□□ 1.88
Naf1Q3UMQ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Naf1Q3UMQ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Naf1Q3UMQ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Naf1Q3UMQ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Naf1Q3UMQ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Naf1Q3UMQ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Naf1Q3UMQ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Naf1Q3UMQ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Naf1Q3UMQ8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Naf1Q3UMQ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Naf1Q3UMQ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.74■■□□□ 1.87
Naf1Q3UMQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.71■■□□□ 1.87
Naf1Q3UMQ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Naf1Q3UMQ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Naf1Q3UMQ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Naf1Q3UMQ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Naf1Q3UMQ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Naf1Q3UMQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.65■■□□□ 1.86
Naf1Q3UMQ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
Naf1Q3UMQ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Naf1Q3UMQ8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Naf1Q3UMQ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Naf1Q3UMQ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Naf1Q3UMQ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Naf1Q3UMQ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.55■■□□□ 1.84
Naf1Q3UMQ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Naf1Q3UMQ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Naf1Q3UMQ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
Naf1Q3UMQ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.51■■□□□ 1.83
Naf1Q3UMQ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Naf1Q3UMQ8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Naf1Q3UMQ8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Naf1Q3UMQ8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Naf1Q3UMQ8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.47■■□□□ 1.83
Naf1Q3UMQ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Naf1Q3UMQ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Naf1Q3UMQ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Naf1Q3UMQ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
Naf1Q3UMQ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Naf1Q3UMQ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Naf1Q3UMQ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Naf1Q3UMQ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Naf1Q3UMQ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.36■■□□□ 1.81
Naf1Q3UMQ8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Naf1Q3UMQ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.35■■□□□ 1.81
Naf1Q3UMQ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Naf1Q3UMQ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Naf1Q3UMQ8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.32■■□□□ 1.8
Naf1Q3UMQ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
Naf1Q3UMQ8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Naf1Q3UMQ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Naf1Q3UMQ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Naf1Q3UMQ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Naf1Q3UMQ8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Naf1Q3UMQ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.26■■□□□ 1.79
Naf1Q3UMQ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.25■■□□□ 1.79
Naf1Q3UMQ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Naf1Q3UMQ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Naf1Q3UMQ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Naf1Q3UMQ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Naf1Q3UMQ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Naf1Q3UMQ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.2■■□□□ 1.78
Naf1Q3UMQ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Naf1Q3UMQ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Naf1Q3UMQ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.18■■□□□ 1.78
Naf1Q3UMQ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Naf1Q3UMQ8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Naf1Q3UMQ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Naf1Q3UMQ8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Naf1Q3UMQ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Naf1Q3UMQ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Naf1Q3UMQ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Naf1Q3UMQ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Naf1Q3UMQ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Naf1Q3UMQ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.15■■□□□ 1.78
Naf1Q3UMQ8 Gm45855-201ENSMUST00000212546 880 ntBASIC26.12■■□□□ 1.77
Naf1Q3UMQ8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Naf1Q3UMQ8 Gm9397-201ENSMUST00000200125 605 ntBASIC26.1■■□□□ 1.77
Naf1Q3UMQ8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Naf1Q3UMQ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
Naf1Q3UMQ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Naf1Q3UMQ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Naf1Q3UMQ8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Naf1Q3UMQ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.04■■□□□ 1.76
Naf1Q3UMQ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Naf1Q3UMQ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.03■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms