Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.96■■□□□ 1.75
Spg11Q3UHA3 Psd-208ENSMUST00000224556 2034 ntBASIC25.95■■□□□ 1.74
Spg11Q3UHA3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.94■■□□□ 1.74
Spg11Q3UHA3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.92■■□□□ 1.74
Spg11Q3UHA3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.92■■□□□ 1.74
Spg11Q3UHA3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Spg11Q3UHA3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.74
Spg11Q3UHA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Spg11Q3UHA3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.88■■□□□ 1.73
Spg11Q3UHA3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Spg11Q3UHA3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Spg11Q3UHA3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Spg11Q3UHA3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Spg11Q3UHA3 Gm8503-201ENSMUST00000118131 455 ntBASIC25.83■■□□□ 1.73
Spg11Q3UHA3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Spg11Q3UHA3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Spg11Q3UHA3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.75■■□□□ 1.71
Spg11Q3UHA3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Spg11Q3UHA3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Spg11Q3UHA3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Spg11Q3UHA3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Spg11Q3UHA3 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.71■■□□□ 1.71
Spg11Q3UHA3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Spg11Q3UHA3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.69■■□□□ 1.7
Spg11Q3UHA3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Spg11Q3UHA3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Spg11Q3UHA3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.62■■□□□ 1.69
Spg11Q3UHA3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.61■■□□□ 1.69
Spg11Q3UHA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Spg11Q3UHA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.61■■□□□ 1.69
Spg11Q3UHA3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Spg11Q3UHA3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Spg11Q3UHA3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.56■■□□□ 1.68
Spg11Q3UHA3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Spg11Q3UHA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.55■■□□□ 1.68
Spg11Q3UHA3 Gm6821-201ENSMUST00000107540 542 ntBASIC25.51■■□□□ 1.67
Spg11Q3UHA3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Spg11Q3UHA3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.5■■□□□ 1.67
Spg11Q3UHA3 Gm24970-201ENSMUST00000175582 82 ntBASIC25.47■■□□□ 1.67
Spg11Q3UHA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Spg11Q3UHA3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.44■■□□□ 1.66
Spg11Q3UHA3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Spg11Q3UHA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Spg11Q3UHA3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Spg11Q3UHA3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Spg11Q3UHA3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.41■■□□□ 1.66
Spg11Q3UHA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Spg11Q3UHA3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Spg11Q3UHA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.4■■□□□ 1.66
Spg11Q3UHA3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Spg11Q3UHA3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.37■■□□□ 1.65
Spg11Q3UHA3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.37■■□□□ 1.65
Spg11Q3UHA3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Spg11Q3UHA3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.31■■□□□ 1.64
Spg11Q3UHA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Spg11Q3UHA3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Spg11Q3UHA3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Spg11Q3UHA3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Spg11Q3UHA3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Spg11Q3UHA3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Spg11Q3UHA3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Spg11Q3UHA3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Spg11Q3UHA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Spg11Q3UHA3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Spg11Q3UHA3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.17■■□□□ 1.62
Spg11Q3UHA3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.17■■□□□ 1.62
Spg11Q3UHA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Spg11Q3UHA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Spg11Q3UHA3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.14■■□□□ 1.61
Spg11Q3UHA3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Spg11Q3UHA3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Spg11Q3UHA3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Spg11Q3UHA3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Spg11Q3UHA3 Mir6538-201ENSMUST00000183713 110 ntBASIC25.07■■□□□ 1.6
Spg11Q3UHA3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.07■■□□□ 1.6
Spg11Q3UHA3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.07■■□□□ 1.6
Spg11Q3UHA3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
Spg11Q3UHA3 Gm7432-201ENSMUST00000210343 879 ntBASIC25.06■■□□□ 1.6
Spg11Q3UHA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Spg11Q3UHA3 Gm15039-201ENSMUST00000118914 875 ntBASIC25.05■■□□□ 1.6
Spg11Q3UHA3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Spg11Q3UHA3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.04■■□□□ 1.6
Spg11Q3UHA3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.04■■□□□ 1.6
Spg11Q3UHA3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Spg11Q3UHA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Spg11Q3UHA3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Spg11Q3UHA3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Spg11Q3UHA3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Spg11Q3UHA3 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.02■■□□□ 1.6
Spg11Q3UHA3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Spg11Q3UHA3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25■■□□□ 1.59
Spg11Q3UHA3 Gm11175-201ENSMUST00000116172 543 ntBASIC24.99■■□□□ 1.59
Spg11Q3UHA3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Spg11Q3UHA3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.96■■□□□ 1.59
Spg11Q3UHA3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Spg11Q3UHA3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.94■■□□□ 1.58
Spg11Q3UHA3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Spg11Q3UHA3 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.93■■□□□ 1.58
Spg11Q3UHA3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Spg11Q3UHA3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms