Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tmem88bQ3TYP4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Tmem88bQ3TYP4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tmem88bQ3TYP4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tmem88bQ3TYP4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tmem88bQ3TYP4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tmem88bQ3TYP4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.05■■□□□ 1.12
Tmem88bQ3TYP4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tmem88bQ3TYP4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tmem88bQ3TYP4 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.01■■□□□ 1.11
Tmem88bQ3TYP4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tmem88bQ3TYP4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tmem88bQ3TYP4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tmem88bQ3TYP4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Tmem88bQ3TYP4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tmem88bQ3TYP4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tmem88bQ3TYP4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tmem88bQ3TYP4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tmem88bQ3TYP4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Tmem88bQ3TYP4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tmem88bQ3TYP4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tmem88bQ3TYP4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tmem88bQ3TYP4 Gm9397-201ENSMUST00000200125 605 ntBASIC21.9■■□□□ 1.1
Tmem88bQ3TYP4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem88bQ3TYP4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tmem88bQ3TYP4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tmem88bQ3TYP4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.87■■□□□ 1.09
Tmem88bQ3TYP4 Mipep-204ENSMUST00000225043 1548 ntBASIC21.87■■□□□ 1.09
Tmem88bQ3TYP4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tmem88bQ3TYP4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tmem88bQ3TYP4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Tmem88bQ3TYP4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem88bQ3TYP4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Tmem88bQ3TYP4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem88bQ3TYP4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem88bQ3TYP4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem88bQ3TYP4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.82■■□□□ 1.08
Tmem88bQ3TYP4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Tmem88bQ3TYP4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem88bQ3TYP4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem88bQ3TYP4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem88bQ3TYP4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Tmem88bQ3TYP4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.79■■□□□ 1.08
Tmem88bQ3TYP4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem88bQ3TYP4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem88bQ3TYP4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.77■■□□□ 1.08
Tmem88bQ3TYP4 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.77■■□□□ 1.08
Tmem88bQ3TYP4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.75■■□□□ 1.07
Tmem88bQ3TYP4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tmem88bQ3TYP4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem88bQ3TYP4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem88bQ3TYP4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem88bQ3TYP4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem88bQ3TYP4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.71■■□□□ 1.07
Tmem88bQ3TYP4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Tmem88bQ3TYP4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tmem88bQ3TYP4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.7■■□□□ 1.06
Tmem88bQ3TYP4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.7■■□□□ 1.06
Tmem88bQ3TYP4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tmem88bQ3TYP4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tmem88bQ3TYP4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmem88bQ3TYP4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tmem88bQ3TYP4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.65■■□□□ 1.06
Tmem88bQ3TYP4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmem88bQ3TYP4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.63■■□□□ 1.05
Tmem88bQ3TYP4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Tmem88bQ3TYP4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.61■■□□□ 1.05
Tmem88bQ3TYP4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.61■■□□□ 1.05
Tmem88bQ3TYP4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tmem88bQ3TYP4 Gm24970-201ENSMUST00000175582 82 ntBASIC21.6■■□□□ 1.05
Tmem88bQ3TYP4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tmem88bQ3TYP4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem88bQ3TYP4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.55■■□□□ 1.04
Tmem88bQ3TYP4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.54■■□□□ 1.04
Tmem88bQ3TYP4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Tmem88bQ3TYP4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tmem88bQ3TYP4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.49■■□□□ 1.03
Tmem88bQ3TYP4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tmem88bQ3TYP4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem88bQ3TYP4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.47■■□□□ 1.03
Tmem88bQ3TYP4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tmem88bQ3TYP4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.46■■□□□ 1.03
Tmem88bQ3TYP4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.45■■□□□ 1.02
Tmem88bQ3TYP4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tmem88bQ3TYP4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tmem88bQ3TYP4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tmem88bQ3TYP4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tmem88bQ3TYP4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.4■■□□□ 1.02
Tmem88bQ3TYP4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tmem88bQ3TYP4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Tmem88bQ3TYP4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.37■■□□□ 1.01
Tmem88bQ3TYP4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem88bQ3TYP4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem88bQ3TYP4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem88bQ3TYP4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tmem88bQ3TYP4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.34■■□□□ 1.01
Tmem88bQ3TYP4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmem88bQ3TYP4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tmem88bQ3TYP4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.33■■□□□ 1.01
Tmem88bQ3TYP4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms